RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 NUAK2Q9H093 628 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 RBM38Q9H0Z9 239 aaKnown RBP27.17■■□□□ 1.94
CCM2-219ENST00000544363 KLHL13Q9P2N7 655 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 LIPGQ9Y5X9 500 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 FKBP7Q9Y680 259 aa27.17■■□□□ 1.94
CCM2-219ENST00000544363 ALPK2Q86TB3 2170 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 H3BSA7 217 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 SMAD9O15198 467 aaKnown RBP27.16■■□□□ 1.94
CCM2-219ENST00000544363 ACTL6AO96019 429 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 PDGFAP04085 211 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 ZNF24P17028 368 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 UCNP55089 124 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 WDFY1Q8IWB7 410 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 OR6K6Q8NGW6 343 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 KCNK17Q96T54 332 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 LDAHQ9H6V9 325 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 CEP295Q9C0D2 2601 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 TFECO14948 347 aaPredicted RBP27.16■■□□□ 1.94
CCM2-219ENST00000544363 TRMUO75648 421 aaKnown RBP27.16■■□□□ 1.94
CCM2-219ENST00000544363 MRPL3P09001 348 aaKnown RBP27.16■■□□□ 1.94
CCM2-219ENST00000544363 TMPRSS3P57727 454 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 ZNF367Q7RTV3 350 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 HDDC2Q7Z4H3 204 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 ZBTB46Q86UZ6 589 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 MEIOBQ8N635 442 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 POMGNT2Q8NAT1 580 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 CPNE4Q96A23 557 aaPredicted RBP27.16■■□□□ 1.94
CCM2-219ENST00000544363 EMC6Q9BV81 110 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 TSPAN10Q9H1Z9 355 aaPredicted RBP27.16■■□□□ 1.94
CCM2-219ENST00000544363 LSM2Q9Y333 95 aaKnown RBP27.16■■□□□ 1.94
CCM2-219ENST00000544363 CEPT1Q9Y6K0 416 aa27.16■■□□□ 1.94
CCM2-219ENST00000544363 KIAA1549Q9HCM3 1950 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 TRGV5A0A0B4J1U4 118 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 FAM171A2A8MVW0 826 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 MYL12BO14950 172 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 AHCYL1O43865 530 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 LIMS3P0CW19 117 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 LIMS4P0CW20 117 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 PLA2G5P39877 138 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 TBR1Q16650 682 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 Q6ZS92 163 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 ACBD7Q8N6N7 88 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 OR5M11Q96RB7 305 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 CNN2Q99439 309 aaKnown RBP27.15■■□□□ 1.94
CCM2-219ENST00000544363 SF3B5Q9BWJ5 86 aaKnown RBP27.15■■□□□ 1.94
CCM2-219ENST00000544363 B9D1Q9UPM9 204 aa27.15■■□□□ 1.94
CCM2-219ENST00000544363 C12orf71A8MTZ7 269 aa27.14■■□□□ 1.94
CCM2-219ENST00000544363 SLC17A1Q14916 467 aa27.14■■□□□ 1.94
CCM2-219ENST00000544363 MED22Q15528 200 aa27.14■■□□□ 1.94
CCM2-219ENST00000544363 VASNQ6EMK4 673 aa27.14■■□□□ 1.94
CCM2-219ENST00000544363 LHFPL3Q86UP9 236 aa27.14■■□□□ 1.94
CCM2-219ENST00000544363 OR6X1Q8NH79 312 aa27.14■■□□□ 1.94
CCM2-219ENST00000544363 ZNF649Q9BS31 505 aa27.14■■□□□ 1.94
CCM2-219ENST00000544363 EXO5Q9H790 373 aa27.14■■□□□ 1.94
CCM2-219ENST00000544363 ERVK13-1Q9NX77 482 aa27.14■■□□□ 1.94
CCM2-219ENST00000544363 TMEM129A0AVI4 362 aa27.13■■□□□ 1.93
CCM2-219ENST00000544363 SRYQ05066 204 aa27.13■■□□□ 1.93
CCM2-219ENST00000544363 CREB3L2Q70SY1 520 aa27.13■■□□□ 1.93
CCM2-219ENST00000544363 SYT14Q8NB59 555 aa27.13■■□□□ 1.93
CCM2-219ENST00000544363 OR9K2Q8NGE7 335 aa27.13■■□□□ 1.93
CCM2-219ENST00000544363 COG8Q96MW5 612 aa27.13■■□□□ 1.93
CCM2-219ENST00000544363 RERGLQ9H628 205 aa27.13■■□□□ 1.93
CCM2-219ENST00000544363 INPP5EQ9NRR6 644 aa27.13■■□□□ 1.93
CCM2-219ENST00000544363 SLC35F4A4IF30 521 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 NPIPA2E9PIF3 369 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 NPIPA3F8WFD2 350 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 K7EM74 188 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 SLC16A7O60669 478 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 CRABP1P29762 137 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 GTF2A1P52655 376 aaPredicted RBP27.12■■□□□ 1.93
CCM2-219ENST00000544363 RPS3AP61247 264 aaKnown RBP27.12■■□□□ 1.93
CCM2-219ENST00000544363 TIGD6Q17RP2 521 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 OR10H4Q8NGA5 316 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 DGCR14Q96DF8 476 aaKnown RBP27.12■■□□□ 1.93
CCM2-219ENST00000544363 SLC25A44Q96H78 314 aaPredicted RBP27.12■■□□□ 1.93
CCM2-219ENST00000544363 ZNF845Q96IR2 970 aaPredicted RBP27.12■■□□□ 1.93
CCM2-219ENST00000544363 ADAD1Q96M93 576 aaKnown RBP27.12■■□□□ 1.93
CCM2-219ENST00000544363 MRPL13Q9BYD1 178 aaKnown RBP27.12■■□□□ 1.93
CCM2-219ENST00000544363 IGHG3P01860 377 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 CTLA4P16410 223 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 SPHARQ15513 63 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 CLVS1Q8IUQ0 354 aaPredicted RBP27.12■■□□□ 1.93
CCM2-219ENST00000544363 RBMXL3Q8N7X1 1067 aaKnown RBP27.12■■□□□ 1.93
CCM2-219ENST00000544363 ROBO4Q8WZ75 1007 aa27.12■■□□□ 1.93
CCM2-219ENST00000544363 FRYQ5TBA9 3013 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 IGLV1-36A0A0B4J1U3 117 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 CCDC160A6NGH7 325 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 IGHG1P01857 330 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 CLDN17P56750 224 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 ACTC1P68032 377 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 ACTA1P68133 377 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 ABLIM2Q6H8Q1 611 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 LYPD4Q6UWN0 246 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 ZNF511Q8NB15 262 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 TBX5Q99593 518 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 RACGAP1Q9H0H5 632 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 PAQR5Q9NXK6 330 aaPredicted RBP27.11■■□□□ 1.93
CCM2-219ENST00000544363 SPRR3Q9UBC9 169 aa27.11■■□□□ 1.93
CCM2-219ENST00000544363 DAPL1A0PJW8 107 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 ZNF726A6NNF4 738 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms