RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CAPZA3Q96KX2 299 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 LGMNQ99538 433 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 GAL3ST1Q99999 423 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 ROGDIQ9GZN7 287 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 DRC3Q9H069 523 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 NSRP1Q9H0G5 558 aaKnown RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 PARLQ9H300 379 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 PRO3102Q9H379 93 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 FBXO44Q9H4M3 255 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF385DQ9H6B1 395 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 NANSQ9NR45 359 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 PXMP2Q9NR77 195 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 PLCXD1Q9NUJ7 323 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 SLC2A6Q9UGQ3 507 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 PYGO1Q9Y3Y4 419 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 FAM32AQ9Y421 112 aaKnown RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 L3MBTL1Q9Y468 752 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 AUP1Q9Y679 476 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 RFX7Q2KHR2 1363 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 TJP1Q07157 1748 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 COL4A5P29400 1685 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 SCN7AQ01118 1682 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 KIAA0100Q14667 2235 aaKnown RBP3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 SNED1Q8TER0 1413 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 TRPM7Q96QT4 1865 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 IGHV3OR16-12A0A075B7B8 117 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 A0A1B0GUS0 222 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 LOC105371267A0A1B0GV96 52 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 A0A1W2PPV4 95 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 MPTX1A8MV57 137 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 IDSB3KWA1 339 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 PRR23D1E9PI22 279 aaPredicted RBP3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 ACOT8O14734 319 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 HAT1O14929 419 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 KMOO15229 486 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 YKT6O15498 198 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 LMX1BO60663 402 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 KRT36O76013 467 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 LYPD3O95274 346 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 LCA5LO95447 670 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 APOEP02649 317 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 LGALS2P05162 132 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 S100A6P06703 90 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 ANXA5P08758 320 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 PATE4P0C8F1 98 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 PRR23D2P0DMB1 279 aaPredicted RBP3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 HOXB6P17509 224 aaKnown RBP3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 HSD17B2P37059 387 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 THBS3P49746 956 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 ATP4BP51164 291 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 LIM2P55344 173 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 PKNOX1P55347 436 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 NDUFV3P56181 108 aaKnown RBP3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 ERVFC1-1P60608 527 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 CCL14Q16627 93 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 CNPY1Q3B7I2 92 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF718Q3SXZ3 478 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 C9orf135Q5VTT2 229 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 MLIPQ5VWP3 458 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 BSPRYQ5W0U4 402 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 OR52E8Q6IFG1 317 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 GDPGP1Q6ZNW5 385 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 SLC16A14Q7RTX9 510 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 ZFAND4Q86XD8 727 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 NUDCD3Q8IVD9 361 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 MMAAQ8IVH4 418 aaKnown RBP3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 TCAIMQ8N3R3 496 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 TPRX1Q8N7U7 411 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 AQP11Q8NBQ7 271 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 PROKR2Q8NFJ6 384 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 OR52I1Q8NGK6 324 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 OR4A4PQ8NGN8 299 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 FLVCR1-AS1Q8TAF5 88 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 PLPPR1Q8TBJ4 325 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 DTX3LQ8TDB6 740 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 SSC4DQ8WTU2 575 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 HTR3CQ8WXA8 447 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 TMEM190Q8WZ59 177 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 OR1E3Q8WZA6 343 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 UFD1Q92890 307 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 RAB1CQ92928 201 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 ZBED6CLQ96FA7 236 aaPredicted RBP3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 CCDC42Q96M95 316 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 C9orf85Q96MD7 179 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 KCNA7Q96RP8 456 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 CYP2S1Q96SQ9 504 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 EPYCQ99645 322 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 RACGAP1Q9H0H5 632 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 GBA3Q9H227 469 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 HIPK2Q9H2X6 1198 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 TPK1Q9H3S4 243 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 RBKSQ9H477 322 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 REEP4Q9H6H4 257 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 UGT1A10Q9HAW8 530 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 C12orf10Q9HB07 376 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 TMBIM4Q9HC24 238 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 PAK1IP1Q9NWT1 392 aaPredicted RBP3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 NDE1Q9NXR1 346 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 EURLQ9NYK6 297 aa3.2□□□□□ -1.9
SFSWAP-211ENST00000542813 ATPIF1Q9UII2 106 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms