RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 C8BP07358 591 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 SRP14P37108 136 aaKnown RBP12.15□□□□□ -0.46
SNHG1-213ENST00000540725 GALK2Q01415 458 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 RAB39AQ14964 217 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 FXNQ16595 210 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 RUNDC3AQ59EK9 446 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 ELFN2Q5R3F8 820 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 UGT2A3Q6UWM9 527 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 LINC00114Q6XXX2 140 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 SLC35D2Q76EJ3 337 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 DHDDSQ86SQ9 333 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 RFLNBQ8N5W9 214 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 C1orf159Q96HA4 380 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 MS4A5Q9H3V2 200 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 FBXL3Q9UKT7 428 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 FZR1Q9UM11 496 aa12.15□□□□□ -0.46
SNHG1-213ENST00000540725 CPSF4LA6NMK7 179 aaKnown RBP12.14□□□□□ -0.47
SNHG1-213ENST00000540725 HAX1O00165 279 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 HPXP02790 462 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 PATE4P0C8F1 98 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 TCN1P20061 433 aaPredicted RBP12.14□□□□□ -0.47
SNHG1-213ENST00000540725 LSP1P33241 339 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 ALDH3B1P43353 468 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 SEC24CP53992 1094 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 DVL1P1P54792 670 aaPredicted RBP12.14□□□□□ -0.47
SNHG1-213ENST00000540725 RBBP4Q09028 425 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 MAD2L1BPQ15013 274 aaPredicted RBP12.14□□□□□ -0.47
SNHG1-213ENST00000540725 NPTX1Q15818 432 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 DUSP7Q16829 419 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 CYP51A1Q16850 503 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 ENTPD8Q5MY95 495 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 WDR88Q6ZMY6 472 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 PIWIL3Q7Z3Z3 882 aaKnown RBP12.14□□□□□ -0.47
SNHG1-213ENST00000540725 LRP11Q86VZ4 500 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 SKA3Q8IX90 412 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 GPR32P1Q8NGA4 272 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 OR6T1Q8NGN1 323 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 OR6X1Q8NH79 312 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 FGFBP3Q8TAT2 258 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 TMEM54Q969K7 222 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 GLTPQ9NZD2 209 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 MYEF2Q9P2K5 600 aaKnown RBP12.14□□□□□ -0.47
SNHG1-213ENST00000540725 SLC7A8Q9UHI5 535 aa12.14□□□□□ -0.47
SNHG1-213ENST00000540725 LEF1Q9UJU2 399 aaPredicted RBP12.14□□□□□ -0.47
SNHG1-213ENST00000540725 M0QX08 132 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 TCF21O43680 179 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 LYPD3O95274 346 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 CH25HO95992 272 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 THY1P04216 161 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 SERPINA5P05154 406 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 PCMT1P22061 227 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 GPR6P46095 362 aaPredicted RBP12.13□□□□□ -0.47
SNHG1-213ENST00000540725 MTPNP58546 118 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 ZP4Q12836 540 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 SELPLGQ14242 412 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 MELKQ14680 651 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 ZNF74Q16587 644 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 REP15Q6BDI9 236 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 RINLQ6ZS11 566 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 CARM1Q86X55 608 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 RBM45Q8IUH3 476 aaKnown RBP12.13□□□□□ -0.47
SNHG1-213ENST00000540725 ZNF584Q8IVC4 421 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 SLC22A24Q8N4F4 322 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 RDH5Q92781 318 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 RABEP2Q9H5N1 569 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 NANSQ9NR45 359 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 TAS2R5Q9NYW4 299 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 DUSP13Q9UII6 198 aa12.13□□□□□ -0.47
SNHG1-213ENST00000540725 A0A1W2PPW3 197 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 B4DSR2 109 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 KPNA4O00629 521 aaPredicted RBP12.12□□□□□ -0.47
SNHG1-213ENST00000540725 RNF13O43567 381 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 ENTPD5O75356 428 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 OR8G3PP0DMU2 310 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 ACHEP22303 614 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 COL8A2P25067 703 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 TTC33Q6PID6 262 aaPredicted RBP12.12□□□□□ -0.47
SNHG1-213ENST00000540725 LRFN4Q6PJG9 635 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 GLCCI1Q86VQ1 547 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 RETREG3Q86VR2 466 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 TSPYL5Q86VY4 417 aaPredicted RBP12.12□□□□□ -0.47
SNHG1-213ENST00000540725 DPP10Q8N608 796 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 LRRC17Q8N6Y2 441 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 OR4D11Q8NGI4 311 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 CLDND2Q8NHS1 167 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 VANGL1Q8TAA9 524 aaPredicted RBP12.12□□□□□ -0.47
SNHG1-213ENST00000540725 ADAMTS16Q8TE57 1224 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 DYDC1Q8WWB3 177 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 ZNF566Q969W8 418 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 SLC25A44Q96H78 314 aaPredicted RBP12.12□□□□□ -0.47
SNHG1-213ENST00000540725 CGREF1Q99674 301 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 NARFLQ9H6Q4 476 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 TMEM38BQ9NVV0 291 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 ZNF346Q9UL40 294 aaKnown RBP12.12□□□□□ -0.47
SNHG1-213ENST00000540725 SLC7A7Q9UM01 511 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 NDUFAF1Q9Y375 327 aa12.12□□□□□ -0.47
SNHG1-213ENST00000540725 TRAPPC13A5PLN9 417 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 ANGPT2O15123 496 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 DHHO43323 396 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 NCR1O76036 304 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms