RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TXNIPQ9H3M7 391 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 REV1Q9UBZ9 1251 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 RSL24D1Q9UHA3 163 aaKnown RBP13.71□□□□□ -0.22
DDB1-216ENST00000539739 IL20RAQ9UHF4 553 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 PHF3Q92576 2039 aaKnown RBP13.7□□□□□ -0.22
DDB1-216ENST00000539739 NPIPB13A6NJU9 1138 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 ZNF726A6NNF4 738 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 NPIPB4C9JG80 1138 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 TRAF3IP2O43734 574 aaPredicted RBP13.7□□□□□ -0.22
DDB1-216ENST00000539739 MRPL33O75394 65 aaKnown RBP13.7□□□□□ -0.22
DDB1-216ENST00000539739 ZNF26P17031 533 aaPredicted RBP13.7□□□□□ -0.22
DDB1-216ENST00000539739 PRKACBP22694 351 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 PEX2P28328 305 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 OPRM1P35372 400 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 CLDN17P56750 224 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 FXYD6P3P58550 94 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 ESRRGP62508 458 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 SIRPAP78324 504 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 SLC36A3Q495N2 470 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 OGFRL1Q5TC84 451 aaPredicted RBP13.7□□□□□ -0.22
DDB1-216ENST00000539739 MYO7BQ6PIF6 2116 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 THSD4Q6ZMP0 1018 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 AAED1Q7RTV5 226 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 SLC51BQ86UW2 128 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 IGFN1Q86VF2 1251 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 MED12LQ86YW9 2145 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 LILRB4Q8NHJ6 448 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 TMEM45BQ96B21 275 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 ZNF385AQ96PM9 386 aaKnown RBP13.7□□□□□ -0.22
DDB1-216ENST00000539739 SLC29A1Q99808 456 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 KATNB1Q9BVA0 655 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 TSSK6Q9BXA6 273 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 MED29Q9NX70 200 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 COQ3Q9NZJ6 369 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 ZNF629Q9UEG4 869 aaPredicted RBP13.7□□□□□ -0.22
DDB1-216ENST00000539739 TMEFF2Q9UIK5 374 aaPredicted RBP13.7□□□□□ -0.22
DDB1-216ENST00000539739 SLC5A6Q9Y289 635 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 ARHGAP21Q5T5U3 1957 aa13.7□□□□□ -0.22
DDB1-216ENST00000539739 DOCK7Q96N67 2140 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 A0A0G2JNJ9 132 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 IL18BPO95998 194 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 NOS3P29474 1203 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 KIR2DL2P43627 348 aaPredicted RBP13.69□□□□□ -0.22
DDB1-216ENST00000539739 HSPA13P48723 471 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 SMSP52788 366 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 RPL27P61353 136 aaKnown RBP13.69□□□□□ -0.22
DDB1-216ENST00000539739 ERVK-25P63136 954 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 FOXF2Q12947 444 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 TOP3AQ13472 1001 aaPredicted RBP13.69□□□□□ -0.22
DDB1-216ENST00000539739 GUSBP1Q15486 140 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 ACKR1Q16570 336 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 CLEC12AQ5QGZ9 265 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 C6orf183Q5T699 404 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 GPR139Q6DWJ6 353 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 NIPAL3Q6P499 406 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 CASP12Q6UXS9 341 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 PACRGLQ8N7B6 248 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 ZIC4Q8N9L1 334 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 NAXEQ8NCW5 288 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 OR2T33Q8NG76 320 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 OR6K3Q8NGY3 331 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 TXNDC15Q96J42 360 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 ADAD1Q96M93 576 aaKnown RBP13.69□□□□□ -0.22
DDB1-216ENST00000539739 AIFM2Q9BRQ8 373 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 TEX12Q9BXU0 123 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 PLA2G12AQ9BZM1 189 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 ENKD1Q9H0I2 346 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 NRIP3Q9NQ35 241 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 GRHPRQ9UBQ7 328 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 Q9UFV3 132 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 ERRFI1Q9UJM3 462 aaPredicted RBP13.69□□□□□ -0.22
DDB1-216ENST00000539739 BAIAP2Q9UQB8 552 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 RCE1Q9Y256 329 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 IER3IP1Q9Y5U9 82 aa13.69□□□□□ -0.22
DDB1-216ENST00000539739 DVL2O14641 736 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 MITFO75030 526 aaPredicted RBP13.68□□□□□ -0.22
DDB1-216ENST00000539739 IGHMP01871 453 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 TP53P04637 393 aaPredicted RBP13.68□□□□□ -0.22
DDB1-216ENST00000539739 IGFBP1P08833 259 aaPredicted RBP13.68□□□□□ -0.22
DDB1-216ENST00000539739 APEHP13798 732 aaKnown RBP13.68□□□□□ -0.22
DDB1-216ENST00000539739 CRISP1P54107 249 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 BIDP55957 195 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 APOFQ13790 326 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 MELKQ14680 651 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 FAM205BPQ63HN1 556 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 NHLRC1Q6VVB1 395 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 NUFIP2Q7Z417 695 aaKnown RBP13.68□□□□□ -0.22
DDB1-216ENST00000539739 ZNF100Q8IYN0 542 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 GALNT4Q8N4A0 578 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 OR6X1Q8NH79 312 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 CCDC120Q96HB5 630 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 ERMAPQ96PL5 475 aaPredicted RBP13.68□□□□□ -0.22
DDB1-216ENST00000539739 EMC6Q9BV81 110 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 ZNF346Q9UL40 294 aaKnown RBP13.68□□□□□ -0.22
DDB1-216ENST00000539739 RAB26Q9ULW5 256 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 PROCRQ9UNN8 238 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 SLC35F4A4IF30 521 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 CCDC160A6NGH7 325 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 OR6C65A6NJZ3 312 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 IMPA2O14732 288 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms