RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 CPED1A4D0V7 1026 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 TVP23AA6NH52 213 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 ZNF208O43345 1280 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 GMFGO60234 142 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 FGF5P12034 268 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 CSRP1P21291 193 aaKnown RBP8.39□□□□□ -1.07
UBE3B-207ENST00000537063 PTGDSP41222 190 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 PITPNAQ00169 270 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 TATDN3Q17R31 274 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 TBRG1Q3YBR2 411 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 MRPL14Q6P1L8 145 aaKnown RBP8.39□□□□□ -1.07
UBE3B-207ENST00000537063 PAPD4Q6PIY7 484 aaKnown RBP8.39□□□□□ -1.07
UBE3B-207ENST00000537063 LRRTM1Q86UE6 522 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 PRSS35Q8N3Z0 413 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 YIPF7Q8N8F6 280 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 OR2G2Q8NGZ5 317 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 OR5AK2Q8NH90 309 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 MFSD8Q8NHS3 518 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 CEP76Q8TAP6 659 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 LGALS14Q8TCE9 139 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 METTL21AQ8WXB1 218 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 ASB17Q8WXJ9 295 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 C8orf44Q96CB5 159 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 SLC25A38Q96DW6 304 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 MRPL22Q9NWU5 206 aaKnown RBP8.39□□□□□ -1.07
UBE3B-207ENST00000537063 AK6Q9Y3D8 172 aaKnown RBP8.39□□□□□ -1.07
UBE3B-207ENST00000537063 N6AMT1Q9Y5N5 214 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 SEC16AO15027 2179 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 SLC22A23A1A5C7 686 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 ACOD1A6NK06 481 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 TMEM212A6NML5 194 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 PSMD9O00233 223 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 XKRYO14609 159 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 RGS13O14921 159 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 ARHGEF9O43307 516 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 ITGA10O75578 1167 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 AHSA1O95433 338 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 PTGS2P35354 604 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 MNDAP41218 407 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 APOBEC1P41238 236 aaKnown RBP8.39□□□□□ -1.07
UBE3B-207ENST00000537063 IFITM2Q01629 132 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 BCL2A1Q16548 175 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 TEX30Q5JUR7 227 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 C16orf47Q6ZP98 133 aaPredicted RBP8.39□□□□□ -1.07
UBE3B-207ENST00000537063 CPEB2Q7Z5Q1 589 aaKnown RBP8.39□□□□□ -1.07
UBE3B-207ENST00000537063 BPHLQ86WA6 291 aaPredicted RBP8.39□□□□□ -1.07
UBE3B-207ENST00000537063 LIX1LQ8IVB5 337 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 TCTE3Q8IZS6 198 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 OR6N2Q8NGY6 317 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 OR8B4Q96RC9 309 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 AMELYQ99218 206 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 SLC7A5P2Q9GIP4 190 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 OR2B2Q9GZK3 357 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 TSPAN10Q9H1Z9 355 aaPredicted RBP8.39□□□□□ -1.07
UBE3B-207ENST00000537063 PLEKHA1Q9HB21 404 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 BRD7Q9NPI1 651 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 NLKQ9UBE8 527 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 HRH3Q9Y5N1 445 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 ALG5Q9Y673 324 aa8.39□□□□□ -1.07
UBE3B-207ENST00000537063 PI4KAP42356 2102 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 TRBV11-1A0A0K0K1C0 115 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 FAM240BA0A1B0GVZ2 78 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 RAF1P04049 648 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 CALCBP10092 127 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 KIR3DL2P43630 455 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 CCR9P51686 369 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 MAP2K6P52564 334 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 SCAND1P57086 179 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 RASGEF1BQ0VAM2 473 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 TIGD3Q6B0B8 471 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 LCN10Q6JVE6 187 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 POMZP3Q6PJE2 187 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 STAC2Q6ZMT1 411 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 DPY19L4Q7Z388 723 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 ZNF417Q8TAU3 575 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 C4orf45Q96LM5 186 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 ZNF587Q96SQ5 575 aaPredicted RBP8.38□□□□□ -1.07
UBE3B-207ENST00000537063 TRAF4Q9BUZ4 470 aaPredicted RBP8.38□□□□□ -1.07
UBE3B-207ENST00000537063 OR11A1Q9GZK7 315 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 ABCG5Q9H222 651 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 WDR54Q9H977 334 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 ITGB1BP2Q9UKP3 347 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 CACNG2Q9Y698 323 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 TRIOBPQ9H2D6 2365 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 C11orf98E9PRG8 122 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 MS4A18H0YCH9 400 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 EEF1E1O43324 174 aaKnown RBP8.38□□□□□ -1.07
UBE3B-207ENST00000537063 TPPPO94811 219 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 EMP2P54851 167 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 MFSD13AQ14CX5 517 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 PCK2Q16822 640 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 MS4A18Q3C1V0 323 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 UBE2J2Q8N2K1 259 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 SMIM4Q8WVI0 70 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 ASB10Q8WXI3 467 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 NPAS1Q99742 590 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 HDHD2Q9H0R4 259 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 ZNF275Q9NSD4 429 aaPredicted RBP8.38□□□□□ -1.07
UBE3B-207ENST00000537063 SLCO1C1Q9NYB5 712 aa8.38□□□□□ -1.07
UBE3B-207ENST00000537063 KCNG2Q9UJ96 466 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms