RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 OR2T2Q6IF00 324 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 ZNF813Q6ZN06 617 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 SLC36A1Q7Z2H8 476 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 ARL14EPQ8N8R7 260 aaPredicted RBP3.4□□□□□ -1.87
MCF2-210ENST00000536274 ACBD4Q8NC06 268 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 ZNF485Q8NCK3 441 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 FAM71CQ8NEG0 241 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 STEAP2Q8NFT2 490 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 OR4K2Q8NGD2 314 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 OR8J1Q8NGP2 316 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 OR1J4Q8NGS1 313 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 OR4L1Q8NH43 312 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 RHEBL1Q8TAI7 183 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 LKAAEAR1Q8TD35 194 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 MITD1Q8WV92 249 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 PPP1R1CQ8WVI7 109 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 SUSD6Q92537 303 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 KLK6Q92876 244 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 WNT8BQ93098 351 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 UBL7Q96S82 380 aaPredicted RBP3.4□□□□□ -1.87
MCF2-210ENST00000536274 NPY6RQ99463 290 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 POLR1EQ9GZS1 481 aaKnown RBP3.4□□□□□ -1.87
MCF2-210ENST00000536274 CHST11Q9NPF2 352 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 MRPL17Q9NRX2 175 aaKnown RBP3.4□□□□□ -1.87
MCF2-210ENST00000536274 SERINC1Q9NRX5 453 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 TAS2R13Q9NYV9 303 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 KLK14Q9P0G3 267 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 FOXJ2Q9P0K8 574 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 TNFSF13BQ9Y275 285 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 A0A0D9SG52 128 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 C13orf42A0A1B0GVH6 325 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 A0A1B0GW55 424 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 UBE2QL1A1L167 161 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 LINC01553A4QN01 128 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 MYADML2A6NDP7 307 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 OR52A4PA6NMU1 304 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 J3QLW9 94 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ACOT7O00154 380 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 NDUFS3O75489 264 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 UBL3O95164 117 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 BPNT1O95861 308 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 GUSBP08236 651 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ELFN1P0C7U0 828 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 DUX4L2P0CJ85 424 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 DUX4L3P0CJ86 424 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 DUX4L4P0CJ87 422 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 DUX4L5P0CJ88 424 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 DUX4L6P0CJ89 424 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 DUX4L7P0CJ90 424 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ZNF19P17023 458 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 BMP7P18075 431 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 MMP11P24347 488 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ELAVL4P26378 380 aaKnown RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 SOAT1P35610 550 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 GEMP55040 296 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 SLC26A5P58743 744 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 EFNB1P98172 346 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 PJVKQ0ZLH3 352 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 CLN3Q13286 438 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 UPP1Q16831 310 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 CLEC12BQ2HXU8 276 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ZNF630Q2M218 657 aaPredicted RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 TTLL9Q3SXZ7 439 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ZNF385BQ569K4 471 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 AKR1C8PQ5T2L2 129 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 TMEM244Q5VVB8 128 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 SLC22A10Q63ZE4 541 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 MRM1Q6IN84 353 aaKnown RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 TNFAIP8L2Q6P589 184 aaPredicted RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 UQCC3Q6UW78 93 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 FRRS1Q6ZNA5 592 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 OR5AP2Q8NGF4 316 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 OR56B1Q8NGI3 324 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 CD200R1Q8TD46 325 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 SMIM4Q8WVI0 70 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 OR8D1Q8WZ84 308 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 FRZBQ92765 325 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 EXTL1Q92935 676 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ZNF689Q96CS4 500 aaPredicted RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 RRNAD1Q96FB5 475 aaKnown RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 IMP4Q96G21 291 aaKnown RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 KIRREL1Q96J84 757 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 HSPA12BQ96MM6 686 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 MRI1Q9BV20 369 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 GPR174Q9BXC1 333 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 TCEAL2Q9H3H9 227 aaPredicted RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 MFSD1Q9H3U5 465 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 POFUT1Q9H488 388 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 JPH1Q9HDC5 661 aaPredicted RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 C19orf12Q9NSK7 152 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 HCFC1R1Q9NWW0 138 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 TAS2R10Q9NYW0 307 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 STOX2Q9P2F5 926 aaPredicted RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 DUX4Q9UBX2 424 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 A4GNTQ9UNA3 340 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 NTNG1Q9Y2I2 539 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 PPIL1Q9Y3C6 166 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ENPP4Q9Y6X5 453 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 MYO15AQ9UKN7 3530 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 HEATR5AQ86XA9 2040 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms