RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 NUDT7P0C024 238 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 HLA-DOBP13765 273 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 DRD4P21917 467 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 HTR2AP28223 471 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 KLF3P57682 345 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MVKQ03426 396 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RBBP4Q09028 425 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MSMPQ1L6U9 139 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PCGF3Q3KNV8 242 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 CEP85LQ5SZL2 805 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 GCNT6Q5T4J0 391 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 TMEM53Q6P2H8 277 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ZNF627Q7L945 461 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 TREML1Q86YW5 311 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 BHLHE22Q8NFJ8 381 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 NFKBIDQ8NI38 313 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 YIPF5Q969M3 257 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 TIMD4Q96H15 378 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ZNF607Q96SK3 696 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 LRMDAQ9H2I8 198 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 C1orf198Q9H425 327 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 DECR2Q9NUI1 292 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLCO1C1Q9NYB5 712 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MYEF2Q9P2K5 600 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 IGKV1D-42A0A075B6H8 117 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 TMEM89A2RUT3 159 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 CLDN25C9JDP6 229 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 C11orf98E9PRG8 122 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MS4A18H0YCH9 400 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 NCR1O76036 304 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MT-ATP6P00846 226 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PTHP01270 115 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 FAM157BP0CG42 384 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ADORA3P0DMS8 318 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PPIBP23284 216 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RAD52P43351 418 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MAGEB1P43366 347 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 BIDP55957 195 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 FXNQ16595 210 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MOGQ16653 247 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 TBC1D28Q2M2D7 210 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MS4A18Q3C1V0 323 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 AVPI1Q5T686 147 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 REEP3Q6NUK4 255 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 DHRS4L2Q6PKH6 230 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PIWIL3Q7Z3Z3 882 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PXKQ7Z7A4 578 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 CROCCP2Q86T23 111 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLC30A7Q8NEW0 376 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 OR9I1Q8NGQ6 314 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 OR1J2Q8NGS2 313 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SYNPRQ8TBG9 265 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 C11orf40Q8WZ69 217 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLC41A3Q96GZ6 507 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 TXNDC15Q96J42 360 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RACGAP1Q9H0H5 632 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 OR51B6Q9H340 312 aa11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 HINT3Q9NQE9 182 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SDR39U1Q9NRG7 319 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MRPL39Q9NYK5 338 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-207ENST00000535958 IQCMA0A1B0GVH7 501 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 C17orf100A8MU93 164 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 J3QLI3 93 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 WNT9BO14905 357 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RNF13O43567 381 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SERPINB7O75635 380 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 BGLAPP02818 100 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SERPINA5P05154 406 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 OR8G3PP0DMU2 310 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLC6A2P23975 617 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 CCL8P80075 99 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 CDK6Q00534 326 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PLP2Q04941 152 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 OR1Q1Q15612 314 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 HFEQ30201 348 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLC36A2Q495M3 483 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SWT1Q5T5J6 900 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 DCAF12L2Q5VW00 463 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 WDR93Q6P2C0 686 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLC2A7Q6PXP3 512 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RBMS3Q6XE24 437 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 C1QL2Q7Z5L3 287 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 DPPA2Q7Z7J5 298 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLC22A24Q8N4F4 322 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MREGQ8N565 214 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 OR5J2Q8NH18 312 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 NANPQ8TBE9 248 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 GTF2H4Q92759 462 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ZNF566Q969W8 418 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 EVA1AQ9H8M9 152 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SAP30LQ9HAJ7 183 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 CORO2BQ9UQ03 480 aa11.1□□□□□ -0.63
TNFRSF1A-207ENST00000535958 A0A0B4J2E0 115 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 IGHV1-69-2A0A0G2JMI3 117 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 A0A1B0GX12 115 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PLPP3O14495 311 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RP2O75695 350 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ARAFP10398 606 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 BMP2P12643 396 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 FPR2P25090 351 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms