RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 TFPTP0C1Z6 253 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 OR12D1P0DN82 309 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 TAC1P20366 129 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 ATP5F1P24539 256 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-206ENST00000535290 IER3P46695 156 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 PLTPP55058 493 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 UCP2P55851 309 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 PCBP3P57721 371 aaKnown RBP6.9□□□□□ -1.3
CLIP1-206ENST00000535290 FGF12P61328 243 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 BTG1P62324 171 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 HBA1P69905 142 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 CD69Q07108 199 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 CAMK2DQ13557 499 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 C1DQ13901 141 aaKnown RBP6.9□□□□□ -1.3
CLIP1-206ENST00000535290 DOC2BQ14184 412 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 LARS2Q15031 903 aaKnown RBP6.9□□□□□ -1.3
CLIP1-206ENST00000535290 MOGQ16653 247 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 LIPMQ5VYY2 423 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 CLEC6AQ6EIG7 209 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF774Q6NX45 483 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 C6orf120Q7Z4R8 191 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 CREG2Q8IUH2 290 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 SKA3Q8IX90 412 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 CCNYL1Q8N7R7 359 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 FBXO25Q8TCJ0 367 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 SLC25A36Q96CQ1 311 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 L3HYPDHQ96EM0 354 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 OXGR1Q96P68 337 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 ERP44Q9BS26 406 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 SSBP3Q9BWW4 388 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-206ENST00000535290 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 EGLN1Q9GZT9 426 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 DENND2DQ9H6A0 471 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-206ENST00000535290 ZFAND3Q9H8U3 227 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 TMEM106BQ9NUM4 274 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-206ENST00000535290 POFUT2Q9Y2G5 429 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 PCDHGB5Q9Y5G0 923 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 SACSQ9NZJ4 4579 aa6.9□□□□□ -1.31
CLIP1-206ENST00000535290 WI2-2373I1.2A0A1W2PRP0 233 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 PRAMEF27A3QJZ7 478 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 CFAP73A6NFT4 308 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 C3orf84H3BNL1 204 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 CFLARO15519 480 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 CRCPO75575 148 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 UBL3O95164 117 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 RPLP1P05386 114 aaKnown RBP6.89□□□□□ -1.31
CLIP1-206ENST00000535290 GUSBP08236 651 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 SOAT1P35610 550 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 MPV17P39210 176 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 SMCPP49901 116 aaPredicted RBP6.89□□□□□ -1.31
CLIP1-206ENST00000535290 BPIFB3P59826 476 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 RPL38P63173 70 aaKnown RBP6.89□□□□□ -1.31
CLIP1-206ENST00000535290 C2orf54Q08AI8 447 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 BST1Q10588 318 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 EPS8Q12929 822 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 PMS2P3Q13401 168 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 LSM12Q3MHD2 195 aaKnown RBP6.89□□□□□ -1.31
CLIP1-206ENST00000535290 LYG1Q8N1E2 194 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 CPEB3Q8NE35 698 aaKnown RBP6.89□□□□□ -1.31
CLIP1-206ENST00000535290 XAGE5Q8WWM1 108 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 OIT3Q8WWZ8 545 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 CFHR4Q92496 578 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 MOAP1Q96BY2 351 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 ROPN1LQ96C74 230 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 SIGLEC11Q96RL6 698 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 FOXB1Q99853 325 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 EMC6Q9BV81 110 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 PTDSS2Q9BVG9 487 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 OR51I1Q9H343 314 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 NANOGQ9H9S0 305 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 CDH20Q9HBT6 801 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 TMEM165Q9HC07 324 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 POLE3Q9NRF9 147 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 EXD2Q9NVH0 621 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 FBXL3Q9UKT7 428 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 FOXJ3Q9UPW0 622 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 LRCH1Q9Y2L9 728 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 SIGLEC9Q9Y336 463 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 GPR45Q9Y5Y3 372 aa6.89□□□□□ -1.31
CLIP1-206ENST00000535290 CENPVL3A0A0U1RRI6 287 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 A6NHS1 94 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 SLC28A1O00337 649 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 MFN2O95140 757 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 SFTPBP07988 381 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 CD55P08174 381 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 GSTA1P08263 222 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 ADH4P08319 380 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 GKN3PP0CG01 181 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 CDC25BP30305 580 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 HPCAL1P37235 193 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 MDH2P40926 338 aaKnown RBP6.88□□□□□ -1.31
CLIP1-206ENST00000535290 GNB2P62879 340 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 GSTA3Q16772 222 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 NRN1LQ496H8 165 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 SPATA46Q5T0L3 261 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 THEM4Q5T1C6 240 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 DHRS7BQ6IAN0 325 aaPredicted RBP6.88□□□□□ -1.31
CLIP1-206ENST00000535290 SLC35E4Q6ICL7 350 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 TNFAIP8L2Q6P589 184 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms