RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 HIPK1Q86Z02 1210 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 SULF2Q8IWU5 870 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 SETD9Q8NE22 299 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 OR4K17Q8NGC6 315 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 FNDC11Q9BVV2 318 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 NMNAT1Q9HAN9 279 aaPredicted RBP9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 PLA2G3Q9NZ20 509 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 RNF6Q9Y252 685 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 A0A087WUJ7 227 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 MT-ND1P03886 318 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 ZNF41P51814 821 aaPredicted RBP9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 CTBP2P56545 445 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 SLC35A2P78381 396 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 ASAH1Q13510 395 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 TATDN3Q17R31 274 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 NDUFAF6Q330K2 333 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 PRAMEF20Q5VT98 475 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 PYHIN1Q6K0P9 492 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 GATSQ8NAP1 163 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 ZNF540Q8NDQ6 660 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 STK35Q8TDR2 534 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 ACOT11Q8WXI4 607 aaPredicted RBP9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 LINC00052Q96N35 136 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 RBM4BQ9BQ04 359 aaKnown RBP9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 RBM4Q9BWF3 364 aaKnown RBP9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 DUSP21Q9H596 190 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 ACKR4Q9NPB9 350 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 MLXQ9UH92 298 aa9.29□□□□□ -0.92
CAPRIN1-215ENST00000533657 A0A0G2JMM0 328 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 A0A1W2PPB8 328 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 RPS10-NUDT3A0A1W2PQS6 291 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 A0A1W2PRS3 328 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 KIR3DP1A8MWS1 328 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 SGCEO43556 437 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 FRS3O43559 492 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 GADD45GO95257 159 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 MT-ND2P03891 347 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 FCER2P06734 321 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 CHMP24386 653 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 MEOX1P50221 254 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 SPIBQ01892 262 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 ZNF770Q6IQ21 691 aaPredicted RBP9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 CD300LDQ6UXZ3 194 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 TRILQ7L0X0 811 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 RBMXL3Q8N7X1 1067 aaKnown RBP9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 SLC25A43Q8WUT9 341 aaPredicted RBP9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 LIPHQ8WWY8 451 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 FCGR1BQ92637 280 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 ZDHHC11Q9H8X9 412 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 VNN3Q9NY84 501 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 RPS6KB2Q9UBS0 482 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 ORC6Q9Y5N6 252 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 hCG_1807616A0A1W2PRN6 198 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 PINLYPA6NC86 204 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 SMLR1H3BR10 107 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 J3KTA2 159 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 MYL12BO14950 172 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 PLATP00750 562 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 MYL12AP19105 171 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 IDH2P48735 452 aaKnown RBP9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 MASP1P48740 699 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 DNASE1L1P49184 302 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 CDH12P55289 794 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 CXCR4P61073 352 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 SWI5Q1ZZU3 235 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 MICAQ29983 383 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 ANKRD39Q53RE8 183 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 EEF1A1P5Q5VTE0 462 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 MBOAT2Q6ZWT7 520 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 STX19Q8N4C7 294 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 C9orf43Q8TAL5 461 aaPredicted RBP9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 CNIH3Q8TBE1 160 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 POC1BQ8TC44 478 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 PNPLA2Q96AD5 504 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 MBOAT4Q96T53 435 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 TTTY12Q9BZ98 90 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 ANKRD10Q9NXR5 420 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 MED11Q9P086 117 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 FBXL2Q9UKC9 423 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 NTNG1Q9Y2I2 539 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 SPIN1Q9Y657 262 aaPredicted RBP9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 NCKAP5O14513 1909 aa9.28□□□□□ -0.92
CAPRIN1-215ENST00000533657 A0A1W2PQ09 198 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 TUBAL3A6NHL2 446 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 CPSF4LA6NMK7 179 aaKnown RBP9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 TNFRSF11BO00300 401 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 NPIPB7O75200 414 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 TNFSF8P32971 234 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 B3GALT5-AS1P59052 145 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 PIN1Q13526 163 aaPredicted RBP9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 RAPSNQ13702 412 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 BAK1Q16611 211 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 ALG10BQ5I7T1 473 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 SLC35F1Q5T1Q4 408 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 FAHD1Q6P587 224 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 KLHL17Q6TDP4 642 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 ASB18Q6ZVZ8 466 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 SLC37A3Q8NCC5 494 aa9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 TRMT61AQ96FX7 289 aaKnown RBP9.27□□□□□ -0.93
CAPRIN1-215ENST00000533657 MND1Q9BWT6 205 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms