RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ZNF638Q14966 1978 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ELOA3DA6NLF2 546 aaPredicted RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 NPIPA7E9PJI5 369 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 GAPDHSO14556 408 aaPredicted RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ERAL1O75616 437 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 RCBTB2O95199 551 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 NPIPA8P0DM63 369 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 CRABP1P29762 137 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ARRB1P49407 418 aaPredicted RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 AGFG1P52594 562 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 PCBP4P57723 403 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 IL13RA1P78552 427 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 DMWDQ09019 674 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 IRF4Q15306 451 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ELOA3BQ3SY89 546 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 LIPNQ5VXI9 398 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ETV3LQ6ZN32 361 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ZNF584Q8IVC4 421 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ELOA3Q8NG57 546 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 OR13H1Q8NG92 308 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 CD200R1Q8TD46 325 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 LCN9Q8WX39 176 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 NKD1Q969G9 470 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 GLYATL1Q969I3 302 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 NELFAQ9H3P2 528 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 OPN4Q9UHM6 478 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ING1Q9UK53 422 aaPredicted RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 MMP17Q9ULZ9 603 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 FAM96BQ9Y3D0 163 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 TRPM6Q9BX84 2022 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 hCG_1809904A0A1W2PP81 198 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 A0A1W2PR64 198 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 A0A1W2PRV1 198 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 CXorf65A6NEN9 183 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 TMEM202A6NGA9 273 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ANKRD61A6NGH8 418 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 M0R296 226 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 SAP18O00422 153 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 SEMA7AO75326 666 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 IFNA21P01568 189 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 SERPINA5P05154 406 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 CISD3P0C7P0 127 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 TMEM11P17152 192 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 BCKDHBP21953 392 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 IGFALSP35858 605 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ZNF84P51523 738 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 MVDP53602 400 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 PNLIPRP1P54315 467 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 PPIAP62937 165 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ZNF763Q0D2J5 394 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ZNF239Q16600 458 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 LINC00303Q3SY05 128 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 PHF19Q5T6S3 580 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 LYSMD4Q5XG99 296 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 OR2T2Q6IF00 324 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 RAB42Q8N4Z0 105 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 METTL27Q8N6F8 245 aaPredicted RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 OR1J2Q8NGS2 313 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 LMLNQ96KR4 655 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 SCGB3A2Q96PL1 93 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 CD180Q99467 661 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ARRDC1-AS1Q9H2J1 176 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ACTL8Q9H568 366 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 MYNNQ9NPC7 610 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ZCCHC3Q9NUD5 404 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 PARPBPQ9NWS1 579 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 URGCP-MRPS24S4R325 110 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 V9GYS6 101 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 SHROOM3Q8TF72 1996 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 A0A1W2PPH5 198 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ZNF726A6NNF4 738 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 DCTN6O00399 190 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 CLN5O75503 358 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 SLC25A12O75746 678 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 YIF1AO95070 293 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 CD160O95971 181 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 SFTPBP07988 381 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 IGFBP1P08833 259 aaPredicted RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 TACSTD2P09758 323 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 LIPCP11150 499 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 AKR1C4P17516 323 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 SLC2A5P22732 501 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ADRA1AP35348 466 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 SOX18P35713 384 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 XCR1P46094 333 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 LSSP48449 732 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 MRPS21P82921 87 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 MAP4K2Q12851 820 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 LASP1Q14847 261 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 NFATC4Q14934 902 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 OR2A2Q6IF42 318 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 PODNL1Q6PEZ8 512 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 GALNTL5Q7Z4T8 443 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ETFBKMTQ8IXQ9 262 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 OR6K6Q8NGW6 343 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 THAP4Q8WY91 577 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 SMPDL3BQ92485 455 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 FATE1Q969F0 183 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 ISOC2Q96AB3 205 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 AKR1E2Q96JD6 320 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms