RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CX3CR1P49238 355 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 TBPL2Q6SJ96 375 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 SBF2Q86WG5 1849 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 GALNT16Q8N428 558 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 RNF128Q8TEB7 428 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 H1FXQ92522 213 aaKnown RBP10.36□□□□□ -0.75
PTPRK-221ENST00000532331 OR2A14Q96R47 310 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 HES7Q9BYE0 225 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 ANKRD19PQ9H560 264 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 TP53TG5Q9Y2B4 290 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 BTBD17A6NE02 478 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 CD300LBA8K4G0 201 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 FZD7O75084 574 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 CELA2BP08218 269 aaPredicted RBP10.36□□□□□ -0.75
PTPRK-221ENST00000532331 OR8G3PP0DMU2 310 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 PRKACBP22694 351 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 ILKQ13418 452 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 GLYR1Q49A26 553 aaPredicted RBP10.36□□□□□ -0.75
PTPRK-221ENST00000532331 EXOSC6Q5RKV6 272 aaKnown RBP10.36□□□□□ -0.75
PTPRK-221ENST00000532331 OR5M9Q8NGP3 310 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 MZB1Q8WU39 189 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 SPACA9Q96E40 222 aaPredicted RBP10.36□□□□□ -0.75
PTPRK-221ENST00000532331 ERVMER34-1Q9H9K5 563 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 LHX9Q9NQ69 397 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 OLAHQ9NV23 265 aa10.36□□□□□ -0.75
PTPRK-221ENST00000532331 MCM3APO60318 1980 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 A0A087WUU8 490 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 MEIS3P1A6NDR6 274 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 FRG2CA6NGY1 282 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 NOTOA8MTQ0 251 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 H7C2Y5 167 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 ARPC1BO15143 372 aaKnown RBP10.35□□□□□ -0.75
PTPRK-221ENST00000532331 CXCL13O43927 109 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 MT-CO2P00403 227 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 TFP02787 698 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 GAAP10253 952 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 RUNX2Q13950 521 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 C6orf183Q5T699 404 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 DPY19L2P2Q6ZN68 376 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 ADGRF3Q8IZF5 1079 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 OR2T35Q8NGX2 323 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 CT55Q8WUE5 264 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 DCUN1D4Q92564 292 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 WWTR1Q9GZV5 400 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 LAT2Q9GZY6 243 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 MED20Q9H944 212 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 B3GAT1Q9P2W7 334 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 PAHP00439 452 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 TRIM23P36406 574 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 RAD52P43351 418 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 ZNF169Q14929 603 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-221ENST00000532331 ARHGAP11BQ3KRB8 267 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 OR2G6Q5TZ20 316 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 JMJD6Q6NYC1 403 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-221ENST00000532331 MTFR2Q6P444 385 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 Q6ZPB1 254 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-221ENST00000532331 PELI3Q8N2H9 469 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 FNDC9Q8TBE3 224 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 IL1F10Q8WWZ1 152 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 MAFIPQ8WZ33 124 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 PSMF1Q92530 271 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 TTC9Q92623 222 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 OR5B12Q96R08 314 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 CCDC163A0A0D9SF12 145 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 TMEM72A0PK05 275 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 CLDN24A6NM45 220 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 CYB5BO43169 146 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 TAS2R20P59543 309 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 SMN1Q16637 294 aaKnown RBP10.35□□□□□ -0.75
PTPRK-221ENST00000532331 NXNL2Q5VZ03 156 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 MEX3BQ6ZN04 569 aaKnown RBP10.35□□□□□ -0.75
PTPRK-221ENST00000532331 GDF7Q7Z4P5 450 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 SULF2Q8IWU5 870 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 GTPBP8Q8N3Z3 284 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-221ENST00000532331 ZFAND1Q8TCF1 268 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 LANCL2Q9NS86 450 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 RLIMQ9NVW2 624 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 KCNK2O95069 426 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 TAS2R19P59542 299 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 FAPQ12884 760 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 CYHR1Q6ZMK1 362 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 BHLHA9Q7RTU4 235 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 MAVSQ7Z434 540 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 SLC43A2Q8N370 569 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 ST8SIA1Q92185 356 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 ZNF419Q96HQ0 510 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-221ENST00000532331 WDR76Q9H967 626 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 OTOL1A6NHN0 477 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-221ENST00000532331 GAPDHSO14556 408 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-221ENST00000532331 MOSPD3O75425 235 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 GPX2P18283 190 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 GABRA5P31644 462 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 NR4A2P43354 598 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 UBE2NLQ5JXB2 153 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 COX15Q7KZN9 410 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 OR7G2Q8NG99 324 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 OR6F1Q8NGZ6 308 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 MUL1Q969V5 352 aa10.35□□□□□ -0.75
PTPRK-221ENST00000532331 NDRG4Q9ULP0 352 aaKnown RBP10.35□□□□□ -0.75
PTPRK-221ENST00000532331 COL4A1P02462 1669 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms