RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 SPEF1Q9Y4P9 236 aa11.61□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF503-AS2A6NEH8 195 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 VWC2LB2RUY7 222 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 MGRN1O60291 552 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 CH25HO95992 272 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 IFNA2P01563 188 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 ERCC1P07992 297 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-207ENST00000527189 CELA3BP08861 270 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 ASAH2BP0C7U1 165 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 THRBP10828 461 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 IFNGR1P15260 489 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 THBS4P35443 961 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 RBM34P42696 430 aaKnown RBP11.6□□□□□ -0.55
CAPN1-207ENST00000527189 CSNK1A1P48729 337 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 EVX1P49640 407 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 CRYBA2P53672 197 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 BIDP55957 195 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 LSM11P83369 360 aaKnown RBP eCLIP11.6□□□□□ -0.55
CAPN1-207ENST00000527189 NPRL3Q12980 569 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 KLF10Q13118 480 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 RABL3Q5HYI8 236 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 C6orf52Q5T4I8 152 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 CYB5R2Q6BCY4 276 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 PODNL1Q6PEZ8 512 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 VHLLQ6RSH7 139 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 SLC35D2Q76EJ3 337 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 PCYOX1LQ8NBM8 494 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 VANGL1Q8TAA9 524 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-207ENST00000527189 NEU4Q8WWR8 484 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-207ENST00000527189 TMEM54Q969K7 222 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 SLC25A44Q96H78 314 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF75AQ96N20 296 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 DOK1Q99704 481 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 PIMREGQ9BSJ6 248 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 SEC61A2Q9H9S3 476 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 SAR1AQ9NR31 198 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 GID8Q9NWU2 228 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 GLTPQ9NZD2 209 aa11.6□□□□□ -0.55
CAPN1-207ENST00000527189 SONP18583 2426 aaKnown RBP11.6□□□□□ -0.55
CAPN1-207ENST00000527189 HTR3EA5X5Y0 456 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 CENPBD1B2RD01 187 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 C11orf98E9PRG8 122 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 hCG_2039718K7EN88 272 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 FXYD1O00168 92 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 MRASO14807 208 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 SLC22A2O15244 555 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 RNF13O43567 381 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 UBL3O95164 117 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 HLA-HP01893 362 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 MT-ND1P03886 318 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 CD79AP11912 226 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF35P13682 527 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF14P17017 642 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-207ENST00000527189 NR4A1P22736 598 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 NR4A2P43354 598 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 SEC24CP53992 1094 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 RAB1AP62820 205 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 DAG1Q14118 895 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 CHRFAM7AQ494W8 412 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 NRN1LQ496H8 165 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 CCDC121Q6ZUS5 278 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 DPPA2Q7Z7J5 298 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 MYPOPQ86VE0 399 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-207ENST00000527189 TSPYL5Q86VY4 417 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-207ENST00000527189 LIPHQ8WWY8 451 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF566Q969W8 418 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 ZNF583Q96ND8 569 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 PRSS27Q9BQR3 290 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 NOX3Q9HBY0 568 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 CDC42EP3Q9UKI2 254 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 AP3M1Q9Y2T2 418 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 SH3GLB1Q9Y371 365 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 CMAHPQ9Y471 501 aa11.59□□□□□ -0.55
CAPN1-207ENST00000527189 TMEM129A0AVI4 362 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 SERPINI2O75830 405 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 SEC14L2O76054 403 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 OR5F1O95221 314 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 RAB36O95755 333 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 BCL10O95999 233 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 OR8G3PP0DMU2 310 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 GLRXP35754 106 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 GZMKP49863 264 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 PIGFQ07326 219 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 REP15Q6BDI9 236 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 LRFN4Q6PJG9 635 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 HDDC2Q7Z4H3 204 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 SPATA21Q7Z572 469 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 CARM1Q86X55 608 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 LRRC17Q8N6Y2 441 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 C10orf82Q8WW14 230 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 MEPEQ9NQ76 525 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-207ENST00000527189 FGFR1OP2Q9NVK5 253 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 ZNF224Q9NZL3 707 aa11.58□□□□□ -0.56
CAPN1-207ENST00000527189 YLPM1P49750 1951 aaKnown RBP11.58□□□□□ -0.56
CAPN1-207ENST00000527189 LOC100653049A0A140TA62 436 aa11.57□□□□□ -0.56
CAPN1-207ENST00000527189 BLOC1S5-TXNDC5H3BN57 136 aa11.57□□□□□ -0.56
CAPN1-207ENST00000527189 DHHO43323 396 aa11.57□□□□□ -0.56
CAPN1-207ENST00000527189 KRT34O76011 436 aa11.57□□□□□ -0.56
CAPN1-207ENST00000527189 LY6HO94772 140 aa11.57□□□□□ -0.56
CAPN1-207ENST00000527189 FARS2O95363 451 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms