RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 C16orf47Q6ZP98 133 aaPredicted RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 LRRC74BQ6ZQY2 392 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 LINC00696Q6ZRV3 163 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 ASRGL1Q7L266 308 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 C16orf82Q7Z2V1 217 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 NET1Q7Z628 596 aaPredicted RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 PEX5LQ8IYB4 626 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 MICU2Q8IYU8 434 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 DND1Q8IYX4 353 aaKnown RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 PRR22Q8IZ63 422 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 C10orf111Q8N326 155 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 FBXW8Q8N3Y1 598 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 TMEM156Q8N614 296 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 RNF148Q8N7C7 305 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 BCORP1Q8N888 145 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 ZNF441Q8N8Z8 693 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 ANKFN1Q8N957 763 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 POGLUT1Q8NBL1 392 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 CHDHQ8NE62 594 aaPredicted RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 OR2T12Q8NG77 320 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 NFKBIDQ8NI38 313 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 SPPL2AQ8TCT8 520 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 APOBEC4Q8WW27 367 aaKnown RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 MAL2Q969L2 176 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 TMBIM1Q969X1 311 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 MCUR1Q96AQ8 359 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 TMCO6Q96DC7 493 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 RMND5BQ96G75 393 aaPredicted RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 COL21A1Q96P44 957 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 AGAP4Q96P64 663 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 BTBD9Q96Q07 612 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 TRNT1Q96Q11 434 aaKnown RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 RAB3IPQ96QF0 476 aaPredicted RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 RASL10BQ96S79 203 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 KCTD14Q9BQ13 255 aaPredicted RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 HOXD1Q9GZZ0 328 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 NXF5Q9H1B4 397 aaKnown RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 LRMDAQ9H2I8 198 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 BCL2L10Q9HD36 194 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 A4GALTQ9NPC4 353 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 POLE3Q9NRF9 147 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 GPR83Q9NYM4 423 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 TAS2R3Q9NYW6 316 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 ABI3Q9P2A4 366 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 ABCD2Q9UBJ2 740 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 P2RX2Q9UBL9 471 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 MKLN1Q9UL63 735 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 FAM96BQ9Y3D0 163 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 WDR45Q9Y484 360 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 PCDHGB1Q9Y5G3 927 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 POMT1Q9Y6A1 747 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.01□□□□□ -1.77
USP48-211ENST00000526044 EML6Q6ZMW3 1958 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 GVINP1Q7Z2Y8 2422 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 CFAP54Q96N23 3096 aa4.01□□□□□ -1.77
USP48-211ENST00000526044 CNOT1A5YKK6 2376 aaKnown RBP4□□□□□ -1.77
USP48-211ENST00000526044 DOCK10Q96BY6 2186 aa4□□□□□ -1.77
USP48-211ENST00000526044 DOCK7Q96N67 2140 aa4□□□□□ -1.77
USP48-211ENST00000526044 IGLV5-37A0A075B6J1 123 aa4□□□□□ -1.77
USP48-211ENST00000526044 TRAV34A0A0B4J273 112 aa4□□□□□ -1.77
USP48-211ENST00000526044 A0A1W2PRV1 198 aa4□□□□□ -1.77
USP48-211ENST00000526044 OR6C70A6NIJ9 312 aa4□□□□□ -1.77
USP48-211ENST00000526044 FAM220BPB1ANY3 271 aa4□□□□□ -1.77
USP48-211ENST00000526044 CXCR6O00574 342 aa4□□□□□ -1.77
USP48-211ENST00000526044 TP53I11O14683 189 aa4□□□□□ -1.77
USP48-211ENST00000526044 CASQ2O14958 399 aaPredicted RBP4□□□□□ -1.77
USP48-211ENST00000526044 TSPAN2O60636 221 aa4□□□□□ -1.77
USP48-211ENST00000526044 FCMRO60667 390 aa4□□□□□ -1.77
USP48-211ENST00000526044 ZNF354AO60765 605 aaPredicted RBP4□□□□□ -1.77
USP48-211ENST00000526044 UGT2B11O75310 529 aa4□□□□□ -1.77
USP48-211ENST00000526044 PDE5AO76074 875 aa4□□□□□ -1.77
USP48-211ENST00000526044 PDE9AO76083 593 aa4□□□□□ -1.77
USP48-211ENST00000526044 GAGE7O76087 117 aa4□□□□□ -1.77
USP48-211ENST00000526044 H6PDO95479 791 aa4□□□□□ -1.77
USP48-211ENST00000526044 NADKO95544 446 aaPredicted RBP4□□□□□ -1.77
USP48-211ENST00000526044 PPP1R3DO95685 299 aa4□□□□□ -1.77
USP48-211ENST00000526044 IGKV1D-16P01601 117 aa4□□□□□ -1.77
USP48-211ENST00000526044 ALPPP05187 535 aa4□□□□□ -1.77
USP48-211ENST00000526044 BCHEP06276 602 aa4□□□□□ -1.77
USP48-211ENST00000526044 GAGE12FP0CL80 117 aa4□□□□□ -1.77
USP48-211ENST00000526044 GAGE12GP0CL81 117 aa4□□□□□ -1.77
USP48-211ENST00000526044 GAGE12IP0CL82 117 aa4□□□□□ -1.77
USP48-211ENST00000526044 ETS2P15036 469 aa4□□□□□ -1.77
USP48-211ENST00000526044 HPGDP15428 266 aa4□□□□□ -1.77
USP48-211ENST00000526044 NQO1P15559 274 aaKnown RBP4□□□□□ -1.77
USP48-211ENST00000526044 IL7RP16871 459 aa4□□□□□ -1.77
USP48-211ENST00000526044 GGT1P19440 569 aa4□□□□□ -1.77
USP48-211ENST00000526044 EDN2P20800 178 aa4□□□□□ -1.77
USP48-211ENST00000526044 AGAP20933 346 aa4□□□□□ -1.77
USP48-211ENST00000526044 TBXA2RP21731 343 aa4□□□□□ -1.77
USP48-211ENST00000526044 KDELR2P33947 212 aa4□□□□□ -1.77
USP48-211ENST00000526044 SOX3P41225 446 aa4□□□□□ -1.77
USP48-211ENST00000526044 CYB561P49447 251 aa4□□□□□ -1.77
USP48-211ENST00000526044 TMED10P49755 219 aaKnown RBP4□□□□□ -1.77
USP48-211ENST00000526044 HLCSP50747 726 aa4□□□□□ -1.77
USP48-211ENST00000526044 ATP12AP54707 1039 aa4□□□□□ -1.77
USP48-211ENST00000526044 RPP38P78345 283 aaKnown RBP4□□□□□ -1.77
USP48-211ENST00000526044 HPCAP84074 193 aa4□□□□□ -1.77
USP48-211ENST00000526044 MS4A2Q01362 244 aa4□□□□□ -1.77
USP48-211ENST00000526044 OC90Q02509 493 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms