RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 LPAR3Q9UBY5 353 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 LSM7Q9UK45 103 aaKnown RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 IKZF2Q9UKS7 526 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 ZNF443Q9Y2A4 671 aaPredicted RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 WIF1Q9Y5W5 379 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 ARID1BQ8NFD5 2236 aaPredicted RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 SLC5A10A0PJK1 596 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 BTBD17A6NE02 478 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 ZNF736B4DX44 427 aaPredicted RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 MAN2B1O00754 1011 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 EIF1AYO14602 144 aaKnown RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 FGF16O43320 207 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 EMC8O43402 210 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 KLF4O43474 513 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 TBX19O60806 448 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 LILRB5O75023 590 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 IFNA2P01563 188 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 SERPINA5P05154 406 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 CKMP06732 381 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 RCC1P18754 421 aaPredicted RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 CSNK2A2P19784 350 aaPredicted RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 AGAP20933 346 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 MC3RP41968 323 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 RPS10P46783 165 aaKnown RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 EIF1AXP47813 144 aaKnown RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 CSNK1EP49674 416 aaKnown RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 RBP2P50120 134 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 NDUFA6P56556 154 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 STARD6P59095 220 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 RPS11P62280 158 aaKnown RBP eCLIP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 HTRA4P83105 476 aaPredicted RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 ZNF750Q32MQ0 723 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 POM121L1PQ3SYA9 428 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 AWAT1Q58HT5 328 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 PRAMEF8Q5VWM4 474 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 PRAMEF7Q5VXH5 474 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 GDF6Q6KF10 455 aaPredicted RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 C22orf39Q6P5X5 142 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 PAPD4Q6PIY7 484 aaKnown RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 RHOUQ7L0Q8 258 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 HSD11B1LQ7Z5J1 315 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 DPPA2Q7Z7J5 298 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 TMEM150AQ86TG1 271 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 ETFBKMTQ8IXQ9 262 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 KLHDC8AQ8IYD2 350 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 OR4K14Q8NGD5 310 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 OR5T3Q8NGG3 340 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 OR5AK2Q8NH90 309 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 CD300LFQ8TDQ1 290 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 CA5BP1Q8WTZ4 195 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 TSEN15Q8WW01 171 aaKnown RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 GLYATL1Q969I3 302 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 GAL3ST3Q96A11 431 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 CPNE4Q96A23 557 aaPredicted RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 ZNF689Q96CS4 500 aaPredicted RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 GPR174Q9BXC1 333 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 ALX4Q9H161 411 aaPredicted RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 ZNF106Q9H2Y7 1883 aaKnown RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 SEMA6CQ9H3T2 930 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 C12orf49Q9H741 205 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 C20orf141Q9NUB4 165 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 GAR1Q9NY12 217 aaKnown RBP4.31□□□□□ -1.72
HIPK3-204ENST00000525975 GTF2A1LQ9UNN4 478 aa4.31□□□□□ -1.72
HIPK3-204ENST00000525975 HTTP42858 3142 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 CASP8AP2Q9UKL3 1982 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 KIAA1671Q9BY89 1806 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 CPED1A4D0V7 1026 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 ELOA3DA6NLF2 546 aaPredicted RBP4.3□□□□□ -1.72
HIPK3-204ENST00000525975 IDSB3KWA1 339 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 NPIPB9F8W1W9 429 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 STMND1H3BQB6 276 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 FCMRO60667 390 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 SRPX2O60687 465 aaPredicted RBP4.3□□□□□ -1.72
HIPK3-204ENST00000525975 TMEM127O75204 238 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 YIF1AO95070 293 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 ZFPL1O95159 310 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 POP4O95707 220 aaKnown RBP4.3□□□□□ -1.72
HIPK3-204ENST00000525975 DAOP14920 347 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 ITGA3P26006 1051 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 PSMB6P28072 239 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 PBX2P40425 430 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 PRLHRP49683 370 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 PDX1P52945 283 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 TAS2R60P59551 318 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 SNRPNP63162 240 aaKnown RBP4.3□□□□□ -1.72
HIPK3-204ENST00000525975 LMAN2Q12907 356 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 SLC9A5Q14940 896 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 RSU1Q15404 277 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 HMGN3Q15651 99 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 ELOA3BQ3SY89 546 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 Q499Y3 187 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 ARHGAP40Q5TG30 622 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 CLEC9AQ6UXN8 241 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 TMEM64Q6YI46 380 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 SLC35F3Q8IY50 421 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 TRAM1L1Q8N609 369 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 ELOA3Q8NG57 546 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 SFXN5Q8TD22 340 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 OR8D1Q8WZ84 308 aa4.3□□□□□ -1.72
HIPK3-204ENST00000525975 MRPL38Q96DV4 380 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms