RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 GSG1Q2KHT4 349 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 TMEM249Q2WGJ8 235 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 CYBRD1Q53TN4 286 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 SKA3Q8IX90 412 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 POU5F2Q8N7G0 328 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 PCYOX1LQ8NBM8 494 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 IL17RDQ8NFM7 739 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 PFN4Q8NHR9 129 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 TMEM255BQ8WV15 326 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 RCN3Q96D15 328 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 SLC25A44Q96H78 314 aaPredicted RBP10.7□□□□□ -0.7
VEGFA-223ENST00000523125 DOK1Q99704 481 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 FOXB1Q99853 325 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 C20orf141Q9NUB4 165 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 GID8Q9NWU2 228 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 GLTPQ9NZD2 209 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 GMPR2Q9P2T1 348 aaKnown RBP10.7□□□□□ -0.7
VEGFA-223ENST00000523125 CAPN7Q9Y6W3 813 aa10.7□□□□□ -0.7
VEGFA-223ENST00000523125 DNHD1Q96M86 4753 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 BLOC1S5-TXNDC5H3BN57 136 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 RNF13O43567 381 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 OR5F1O95221 314 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 IGF2P01344 180 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 HIST1H2ABP04908 130 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 CSF3P09919 207 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 PATE4P0C8F1 98 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 PGA4P0DJD7 388 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 PGA3P0DJD8 388 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 NPR2P20594 1047 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 NR4A1P22736 598 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 MDH1P40925 334 aaKnown RBP10.69□□□□□ -0.7
VEGFA-223ENST00000523125 RBM34P42696 430 aaKnown RBP10.69□□□□□ -0.7
VEGFA-223ENST00000523125 PPOXP50336 477 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 TAS2R41P59536 307 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 RAB1AP62820 205 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 VLDLRP98155 873 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 RUNX1T1Q06455 604 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 RPL18Q07020 188 aaKnown RBP10.69□□□□□ -0.7
VEGFA-223ENST00000523125 HIST3H3Q16695 136 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 MSMPQ1L6U9 139 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 DEF8Q6ZN54 512 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 HIST3H2AQ7L7L0 130 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 PIWIL3Q7Z3Z3 882 aaKnown RBP10.69□□□□□ -0.7
VEGFA-223ENST00000523125 MICU2Q8IYU8 434 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 ZCCHC24Q8N2G6 241 aaKnown RBP10.69□□□□□ -0.7
VEGFA-223ENST00000523125 OR2T12Q8NG77 320 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 LIPHQ8WWY8 451 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 HIST1H2ACQ93077 130 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 ZNF566Q969W8 418 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 SEPHS2Q99611 448 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 VRK1Q99986 396 aaPredicted RBP10.69□□□□□ -0.7
VEGFA-223ENST00000523125 MRPL13Q9BYD1 178 aaKnown RBP10.69□□□□□ -0.7
VEGFA-223ENST00000523125 POLR2J2Q9GZM3 115 aaKnown RBP10.69□□□□□ -0.7
VEGFA-223ENST00000523125 POLR2J3Q9H1A7 115 aaKnown RBP10.69□□□□□ -0.7
VEGFA-223ENST00000523125 YAE1D1Q9NRH1 226 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 TMEM38BQ9NVV0 291 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 CMTM6Q9NX76 183 aa10.69□□□□□ -0.7
VEGFA-223ENST00000523125 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.68□□□□□ -0.72e-8■■■□□ 14.7
VEGFA-223ENST00000523125 ELOVL7A1L3X0 281 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 hCG_2039718K7EN88 272 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 OR7A10O76100 309 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 IFNA14P01570 189 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 F13BP05160 661 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 THRBP10828 461 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 UMPSP11172 480 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 FUT1P19526 365 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 GIPRP48546 466 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 PTDSS1P48651 473 aaKnown RBP10.68□□□□□ -0.7
VEGFA-223ENST00000523125 SELENOWP63302 87 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 SNTB2Q13425 540 aaKnown RBP10.68□□□□□ -0.7
VEGFA-223ENST00000523125 DAG1Q14118 895 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 LRRC23Q53EV4 343 aaPredicted RBP10.68□□□□□ -0.7
VEGFA-223ENST00000523125 C6orf52Q5T4I8 152 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 KRT80Q6KB66 452 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 C8orf82Q6P1X6 216 aaPredicted RBP10.68□□□□□ -0.7
VEGFA-223ENST00000523125 NANOGNBQ7Z5D8 188 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 HIPK1Q86Z02 1210 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 ZNF584Q8IVC4 421 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 SLC15A3Q8IY34 581 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 SVOPLQ8N434 492 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 SLC22A24Q8N4F4 322 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 RP9Q8TA86 221 aaKnown RBP10.68□□□□□ -0.7
VEGFA-223ENST00000523125 TMEM239Q8WW34 195 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 FOXN4Q96NZ1 517 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 MDFIQ99750 246 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 DENND2DQ9H6A0 471 aaPredicted RBP10.68□□□□□ -0.7
VEGFA-223ENST00000523125 A4GNTQ9UNA3 340 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 FKBP7Q9Y680 259 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 ATRQ13535 2644 aa10.68□□□□□ -0.7
VEGFA-223ENST00000523125 LOC390937A0A1W2PQ73 354 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 A8MV72 311 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-223ENST00000523125 NDUFS8O00217 210 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 DHHO43323 396 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 PIP5K1CO60331 668 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 UBL3O95164 117 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 BCL10O95999 233 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 QDPRP09417 244 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 OR8G3PP0DMU2 310 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 COX4I1P13073 169 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 USF1P22415 310 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms