RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 NCCRP1Q6ZVX7 275 aaPredicted RBP3.21□□□□□ -1.9
SKP1-208ENST00000521216 NANOGNBQ7Z5D8 188 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 DHDDSQ86SQ9 333 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 SPATA24Q86W54 205 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 OR4F15Q8NGB8 312 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 FAM110BQ8TC76 370 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 MCOLN3Q8TDD5 553 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.21□□□□□ -1.9
SKP1-208ENST00000521216 CEP170P1Q96L14 293 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 RIOK2Q9BVS4 552 aaKnown RBP3.21□□□□□ -1.9
SKP1-208ENST00000521216 PARD6BQ9BYG5 372 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 CENPHQ9H3R5 247 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 PCYOX1Q9UHG3 505 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 EIF3AQ14152 1382 aaKnown RBP3.21□□□□□ -1.9
SKP1-208ENST00000521216 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.2□□□□□ -1.9
SKP1-208ENST00000521216 ARPC4-TTLL3A0A0A6YYG9 625 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 A0A1B0GVL5 298 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 CCDC182A6NF36 153 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 NVLO15381 856 aaKnown RBP3.2□□□□□ -1.9
SKP1-208ENST00000521216 YKT6O15498 198 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 PAHP00439 452 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 GZMAP12544 262 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 TDGF1P13385 188 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 HSD17B2P37059 387 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 TDGF1P3P51864 188 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 CRYBB1P53674 252 aaPredicted RBP3.2□□□□□ -1.9
SKP1-208ENST00000521216 B2MP61769 119 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 EBI3Q14213 229 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 MAPRE2Q15555 327 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 KLHL40Q2TBA0 621 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 CAVIN4Q5BKX8 364 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 OR52W1Q6IF63 320 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 CNIH2Q6PI25 160 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 ANGPTL8Q6UXH0 198 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 CCDC148Q8NFR7 591 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 OR10G9Q8NGN4 311 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 OR1N2Q8NGR9 330 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 PYROXD1Q8WU10 500 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 TCEANC2Q96MN5 208 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 MTMR9Q96QG7 549 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 CCT7Q99832 543 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 SLC17A9Q9BYT1 436 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 DEFB127Q9H1M4 99 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 PPA2Q9H2U2 334 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 CDC42EP4Q9H3Q1 356 aaKnown RBP3.2□□□□□ -1.9
SKP1-208ENST00000521216 NCOR1P1Q9H4R4 102 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 PARVBQ9HBI1 364 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 CALYQ9NYX4 217 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 PSG11Q9UQ72 335 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 ATP6V1DQ9Y5K8 247 aa3.2□□□□□ -1.9
SKP1-208ENST00000521216 KTN1Q86UP2 1357 aaKnown RBP3.2□□□□□ -1.9
SKP1-208ENST00000521216 MTCL1Q9Y4B5 1905 aaKnown RBP3.19□□□□□ -1.9
SKP1-208ENST00000521216 IGLV4-69A0A075B6H9 119 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 IGKV2D-24A0A075B6R9 120 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 KLHL41O60662 606 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 SUPT3HO75486 399 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 CLDN9O95484 217 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 LONP1P36776 959 aaKnown RBP3.19□□□□□ -1.9
SKP1-208ENST00000521216 HNMTP50135 292 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 GBX2P52951 348 aaPredicted RBP3.19□□□□□ -1.9
SKP1-208ENST00000521216 CRISP3P54108 245 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 AIF1P55008 147 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 ERVK-25P63136 954 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 ACTA1P68133 377 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 SMARCB1Q12824 385 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 MADCAM1Q13477 382 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 PPP1R7Q15435 360 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 BCL2A1Q16548 175 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 ENPP6Q6UWR7 440 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 ZFP2Q6ZN57 461 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 TRIM69Q86WT6 500 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 OR52K2Q8NGK3 314 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 PSKH2Q96QS6 385 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 RANBP3Q9H6Z4 567 aaPredicted RBP3.19□□□□□ -1.9
SKP1-208ENST00000521216 C8orf33Q9H7E9 229 aaPredicted RBP3.19□□□□□ -1.9
SKP1-208ENST00000521216 MCCC2Q9HCC0 563 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 MRPL47Q9HD33 250 aaKnown RBP3.19□□□□□ -1.9
SKP1-208ENST00000521216 ZNF226Q9NYT6 803 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 BAZ1AQ9NRL2 1556 aaPredicted RBP3.19□□□□□ -1.9
SKP1-208ENST00000521216 SOGA1O94964 1423 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 NPATQ14207 1427 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 ELP1O95163 1332 aa3.19□□□□□ -1.9
SKP1-208ENST00000521216 ATAD2BQ9ULI0 1458 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 MTUS2Q5JR59 1369 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 A0A096LNJ9 63 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 GOLGA6L7A0A1B0GV03 622 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 RSPH10B2B2RC85 870 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 CETN3O15182 167 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 SLC31A2O15432 143 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 SMIM24O75264 130 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 IL1BP01584 269 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 RSPH10BP0C881 870 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 RORAP35398 523 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 OPRD1P41143 372 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 DSTNP60981 165 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 UBE2HP62256 183 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 MRPS15P82914 257 aaKnown RBP3.18□□□□□ -1.9
SKP1-208ENST00000521216 IFFO1Q0D2I5 559 aa3.18□□□□□ -1.9
SKP1-208ENST00000521216 SCRN3Q0VDG4 424 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms