RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 SYT3Q9BQG1 590 aa13.07□□□□□ -0.32
CSMD1-207ENST00000520451 RABEP2Q9H5N1 569 aa13.07□□□□□ -0.32
CSMD1-207ENST00000520451 DENND2DQ9H6A0 471 aaPredicted RBP13.07□□□□□ -0.32
CSMD1-207ENST00000520451 REV1Q9UBZ9 1251 aa13.07□□□□□ -0.32
CSMD1-207ENST00000520451 M0QX08 132 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 CH25HO95992 272 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 C8BP07358 591 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 GLRXP35754 106 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 ALDH3B1P43353 468 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 MTPNP58546 118 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 RPS23P62266 143 aaKnown RBP13.06□□□□□ -0.32
CSMD1-207ENST00000520451 CCNIQ14094 377 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 SELPLGQ14242 412 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 RAB39AQ14964 217 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 ENTPD8Q5MY95 495 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 LINC00114Q6XXX2 140 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 WDR88Q6ZMY6 472 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 SLC35D2Q76EJ3 337 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 LINC01356Q8N9X3 169 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 VANGL1Q8TAA9 524 aaPredicted RBP13.06□□□□□ -0.32
CSMD1-207ENST00000520451 ATP6V1G3Q96LB4 118 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 CGREF1Q99674 301 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 GLTPQ9NZD2 209 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 FBXL3Q9UKT7 428 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 FZR1Q9UM11 496 aa13.06□□□□□ -0.32
CSMD1-207ENST00000520451 KPNA4O00629 521 aaPredicted RBP13.05□□□□□ -0.32
CSMD1-207ENST00000520451 ANGPT2O15123 496 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 RNF13O43567 381 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 PATE4P0C8F1 98 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 TCN1P20061 433 aaPredicted RBP13.05□□□□□ -0.32
CSMD1-207ENST00000520451 LSP1P33241 339 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 CDH15P55291 814 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 MELKQ14680 651 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 MAD2L1BPQ15013 274 aaPredicted RBP13.05□□□□□ -0.32
CSMD1-207ENST00000520451 ZNF74Q16587 644 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 TTMPQ5BVD1 217 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 TTC33Q6PID6 262 aaPredicted RBP13.05□□□□□ -0.32
CSMD1-207ENST00000520451 PIWIL3Q7Z3Z3 882 aaKnown RBP13.05□□□□□ -0.32
CSMD1-207ENST00000520451 LRP11Q86VZ4 500 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 RBM45Q8IUH3 476 aaKnown RBP13.05□□□□□ -0.32
CSMD1-207ENST00000520451 SKA3Q8IX90 412 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 DPP10Q8N608 796 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 OR6X1Q8NH79 312 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 TMEM54Q969K7 222 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 THOC1Q96FV9 657 aaKnown RBP13.05□□□□□ -0.32
CSMD1-207ENST00000520451 MS4A5Q9H3V2 200 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 NANSQ9NR45 359 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 TMEFF2Q9UIK5 374 aaPredicted RBP13.05□□□□□ -0.32
CSMD1-207ENST00000520451 SLC7A7Q9UM01 511 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 NDUFAF1Q9Y375 327 aa13.05□□□□□ -0.32
CSMD1-207ENST00000520451 LYPD3O95274 346 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 THY1P04216 161 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 PCGF2P35227 344 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 SRP14P37108 136 aaKnown RBP13.04□□□□□ -0.32
CSMD1-207ENST00000520451 SEC24CP53992 1094 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 ZP4Q12836 540 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 NFYCQ13952 458 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 FXNQ16595 210 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 ELFN2Q5R3F8 820 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 PATL1Q86TB9 770 aaKnown RBP13.04□□□□□ -0.32
CSMD1-207ENST00000520451 RETREG3Q86VR2 466 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 ZNF584Q8IVC4 421 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 SLC30A8Q8IWU4 369 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 SLC22A24Q8N4F4 322 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 OR4D11Q8NGI4 311 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 FGFBP3Q8TAT2 258 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 ADAMTS16Q8TE57 1224 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 ZNF566Q969W8 418 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 TAS2R5Q9NYW4 299 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 MYEF2Q9P2K5 600 aaKnown RBP13.04□□□□□ -0.32
CSMD1-207ENST00000520451 SLC7A8Q9UHI5 535 aa13.04□□□□□ -0.32
CSMD1-207ENST00000520451 A0A1W2PPW3 197 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 TRAPPC13A5PLN9 417 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 ENTPD5O75356 428 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 HPXP02790 462 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 HIST1H2ABP04908 130 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 SERPINA5P05154 406 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 OR8G3PP0DMU2 310 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 UMPSP11172 480 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 CD247P20963 164 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 GPR6P46095 362 aaPredicted RBP13.03□□□□□ -0.32
CSMD1-207ENST00000520451 LIPNQ5VXI9 398 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 REP15Q6BDI9 236 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 UGT2A3Q6UWM9 527 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 HIST3H2AQ7L7L0 130 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 TSPYL5Q86VY4 417 aaPredicted RBP13.03□□□□□ -0.32
CSMD1-207ENST00000520451 LRRC17Q8N6Y2 441 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 SLC26A7Q8TE54 656 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 STON2Q8WXE9 905 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 HIST1H2ACQ93077 130 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 TAMM41Q96BW9 452 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 SLC25A44Q96H78 314 aaPredicted RBP13.03□□□□□ -0.32
CSMD1-207ENST00000520451 C1orf159Q96HA4 380 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 MPP4Q96JB8 637 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 SH3GL3Q99963 347 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 ZNF385DQ9H6B1 395 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 NARFLQ9H6Q4 476 aa13.03□□□□□ -0.32
CSMD1-207ENST00000520451 KAT8Q9H7Z6 458 aaKnown RBP13.03□□□□□ -0.32
CSMD1-207ENST00000520451 INTS9Q9NV88 658 aaKnown RBP13.03□□□□□ -0.32
CSMD1-207ENST00000520451 TMEM38BQ9NVV0 291 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms