RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 AKR7A2O43488 359 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 BCL2L11O43521 198 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 GPRIN2O60269 458 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 MRPS14O60783 128 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRIM3O75382 744 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SCO1O75880 301 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC22A5O76082 557 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR7A10O76100 309 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 GOSR1O95249 250 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SNAP29O95721 258 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 TSPAN12O95859 305 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CHRNA1P02708 482 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 C1QBP02746 253 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 FTH1P02794 183 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 MT-ND1P03886 318 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 LGALS2P05162 132 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CHRNGP07510 517 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SFTPBP07988 381 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 HCKP08631 526 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CXCL8P10145 99 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RRASP10301 218 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC2A3P11169 496 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 DBTP11182 482 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 IL7P13232 177 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 FOLR2P14207 255 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 ARF4P18085 180 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 PGAM1P18669 254 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 IL10P22301 178 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 WARSP23381 471 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CYP2F1P24903 491 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 ELK4P28324 431 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 ERP29P30040 261 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SERPINB5P36952 375 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 HSD17B2P37059 387 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 MATKP42679 507 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RPS9P46781 194 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 YAP1P46937 504 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 TKTL1P51854 596 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR2B6P58173 313 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 KRTAP10-8P60410 259 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CXCR4P61073 352 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RPL27P61353 136 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RPL10AP62906 217 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC35A2P78381 396 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CCNA1P78396 465 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 ARF5P84085 180 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 IL1RL1Q01638 556 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF45Q02386 682 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 EMX1Q04741 257 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 EIF4EBP2Q13542 120 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 KRR1Q13601 381 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 VGLL4Q14135 290 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC17A1Q14916 467 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 LTB4RQ15722 352 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CARTPTQ16568 116 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 DGUOKQ16854 277 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 C15orf32Q32M92 178 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 C2orf76Q3KRA6 126 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 GPAT3Q53EU6 434 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 MPPE1Q53F39 396 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF506Q5JVG8 444 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SPANXN3Q5MJ09 141 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 N4BP2L1Q5TBK1 243 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RSBN1Q5VWQ0 802 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 LIPJQ5W064 366 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 REP15Q6BDI9 236 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 ARSKQ6UWY0 536 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SCARA5Q6ZMJ2 495 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 FAM183BPQ6ZVS7 135 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CATSPER4Q7RTX7 472 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 FUNDC1Q8IVP5 155 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 C10orf107Q8IVU9 208 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 OFCC1Q8IZS5 231 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CLEC4FQ8N1N0 589 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 C9orf62Q8N4C0 152 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 DHRSXQ8N5I4 330 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SAMD12Q8N8I0 201 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 COLGALT1Q8NBJ5 622 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR6M1Q8NGM8 313 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 UBA3Q8TBC4 463 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RDH11Q8TC12 318 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 FANK1Q8TC84 345 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RAET1EQ8TD07 263 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 MCOLN3Q8TDD5 553 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 HTR3CQ8WXA8 447 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 GLYATL1Q969I3 302 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 MRPL24Q96A35 216 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 NTAN1Q96AB6 310 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 ESAMQ96AP7 390 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CIDECQ96AQ7 238 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 ISG20Q96AZ6 181 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 PPWD1Q96BP3 646 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 BIRC7Q96CA5 298 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SPATA13Q96N96 652 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RILPQ96NA2 401 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 TSGA13Q96PP4 275 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CSPG4P5Q96PW8 444 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CYP2S1Q96SQ9 504 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 NPY6RQ99463 290 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 KCTD14Q9BQ13 255 aaPredicted RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms