RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 MIPP30301 263 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 AVPR2P30518 371 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR10J1P30954 320 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 BTCP35070 178 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 CASRP41180 1078 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 GPR4P46093 362 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 AVPR1BP47901 424 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC11A1P49279 550 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PNLIPRP2P54317 469 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLDN8P56748 225 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLDN12P56749 244 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 RGS8P57771 180 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 RPL7AP62424 266 aaKnown RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 IL13RA1P78552 427 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 CYCSP99999 105 aaKnown RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SRSF4Q08170 494 aaKnown RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 RASGEF1BQ0VAM2 473 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 NOGQ13253 232 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 GPM6BQ13491 265 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR5I1Q13606 314 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 VEZF1Q14119 521 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ICAM4Q14773 271 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 LASP1Q14847 261 aaKnown RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ARL6IP1Q15041 203 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 MLC1Q15049 377 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SHBQ15464 509 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SHHQ15465 462 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 MAPK14Q16539 360 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SNRNP35Q16560 246 aaKnown RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC36A2Q495M3 483 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 UNC50Q53HI1 259 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 FBXO47Q5MNV8 452 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF678Q5SXM1 525 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 OTUD1Q5VV17 481 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 WSCD1Q658N2 575 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 NCR3LG1Q68D85 454 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 KCTD11Q693B1 232 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ADNP2Q6IQ32 1131 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 RPL22L1Q6P5R6 122 aaKnown RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SMARCD3Q6STE5 483 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 GLB1LQ6UWU2 654 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PRSS57Q6UWY2 283 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 METTL7BQ6UX53 244 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM151BQ6UXP7 276 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMIGD1Q6UXZ0 262 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 HEPN1Q6WQI6 88 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PLPPR4Q7Z2D5 763 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM179BQ7Z7N9 219 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 LINC01551Q86U37 167 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 BIVMQ86UB2 503 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 GLCCI1Q86VQ1 547 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SIAH3Q8IW03 269 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 FBXO16Q8IX29 292 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 C1orf87Q8N0U7 546 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 LINC00471Q8N535 108 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 COLGALT1Q8NBJ5 622 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF738Q8NE65 137 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC30A7Q8NEW0 376 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR4C5Q8NGB2 326 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR5B17Q8NGF7 314 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 RHEBL1Q8TAI7 183 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 NEIL3Q8TAT5 605 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 CD200R1Q8TD46 325 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 EEF1AKMT1Q8WVE0 214 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 NUDCD2Q8WVJ2 157 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ARNTL2Q8WYA1 636 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 RGP1Q92546 391 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PSMG2Q969U7 264 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 CTHRC1Q96CG8 243 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 HAVCR1Q96D42 359 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 MASTLQ96GX5 879 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ITCHQ96J02 903 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 BTF3L4Q96K17 158 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 MRGPRX1Q96LB2 322 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLUHP3Q96NS8 147 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 GPR78Q96P69 363 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 TP53RKQ96S44 253 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 FIZ1Q96SL8 496 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 LPAR4Q99677 370 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 MIEN1Q9BRT3 115 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SYT17Q9BSW7 474 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 COLEC11Q9BWP8 271 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ANGPTL4Q9BY76 406 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PARD6GQ9BYG4 376 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 TBL1XR1Q9BZK7 514 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ELOVL4Q9GZR5 314 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 POLR3FQ9H1D9 316 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR10A4Q9H209 315 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ARV1Q9H2C2 271 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 GSTO2Q9H4Y5 243 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM185BQ9H7F4 350 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM27Q9HBJ8 222 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC2A9Q9NRM0 540 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF701Q9NV72 531 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 KLHL11Q9NVR0 708 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 MRPS18AQ9NVS2 196 aaKnown RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 C2orf42Q9NWW7 574 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 TAS2R13Q9NYV9 303 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SAE1Q9UBE0 346 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PRODH2Q9UF12 536 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms