RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 C1orf131Q8NDD1 294 aaKnown RBP-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 RORBQ92753 470 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 EXT2Q93063 718 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 GPR82Q96P67 336 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 P2RX4Q99571 388 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 FAIM2Q9BWQ8 316 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 TRPV6Q9H1D0 765 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 SMARCAD1Q9H4L7 1026 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 VSIRQ9H7M9 311 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 ERVK-19Q9WJR5 959 aa-1.99□□□□□ -2.73
RNU6-542P-201ENST00000516405 FAM230AA0A1W2PPH8 454 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 MAGEB16A2A368 324 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 ARHGAP42A6NI28 874 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 PP2D1A8MPX8 630 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 C12orf77C9JDV5 145 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 CACNB4O00305 520 aaPredicted RBP-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 FCN1O00602 326 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 GEMIN2O14893 280 aaKnown RBP-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 ALDOBP05062 364 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 FABP3P05413 133 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 RFC2P35250 354 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 CDKN2BP42772 138 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 NOVA1P51513 510 aaKnown RBP-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 PLP1P60201 277 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 PSMC6P62333 389 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 PPFIA1Q13136 1202 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 CDK5R1Q15078 307 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 PON3Q15166 354 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 TAF12Q16514 161 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 EPC2Q52LR7 807 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 GPRC6AQ5T6X5 926 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 FAM199XQ6PEV8 388 aaPredicted RBP-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 RANBP3LQ86VV4 465 aaPredicted RBP-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 HOMEZQ8IX15 550 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 SLC26A10Q8NG04 563 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 OR11H7Q8NGC8 314 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 HAS2Q92819 552 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 MARVELD1Q9BSK0 173 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 GABARAPL3Q9BY60 117 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 REG4Q9BYZ8 158 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 GPR173Q9NS66 373 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 HMGXB4Q9UGU5 601 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 CADPSQ9ULU8 1353 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 VWFP04275 2813 aa-2□□□□□ -2.73
RNU6-542P-201ENST00000516405 SLX4Q8IY92 1834 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 DISP1Q96F81 1524 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 PTPRBP23467 1997 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 CITO14578 2027 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 hCG_2014768A0A024R1R8 64 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 IGHV3-72A0A0B4J1Y9 119 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 GLYATL1P3A0A0U1RQE8 302 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 FAM47DPA6NHR8 397 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 C12orf71A8MTZ7 269 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 H3BMH7 237 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 CHST10O43529 356 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 PLIN1O60240 522 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 DIAPH2O60879 1101 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 CCDC130P13994 396 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 ABOP16442 354 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 SOAT1P35610 550 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 GNPDA1P46926 289 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 TGM4P49221 684 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 CMC4P56277 68 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 C12orf74Q32Q52 190 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 MPV17L2Q567V2 206 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 TIMM23BQ5SRD1 257 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 LRRC66Q68CR7 880 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 OR8G2PQ6IF36 304 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 BTNL3Q6UXE8 466 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 PPP1R21Q6ZMI0 780 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 TMPRSS11AQ6ZMR5 421 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 OR5C1Q8NGR4 320 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 RNASE8Q8TDE3 154 aaKnown RBP-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 CCT6BQ92526 530 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 CPNE4Q96A23 557 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 Q96M85 177 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 RASL10BQ96S79 203 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 CHCHD7Q9BUK0 85 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 RIOK2Q9BVS4 552 aaKnown RBP-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 SLC19A3Q9BZV2 496 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 MED9Q9NWA0 146 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 CWC25Q9NXE8 425 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 XCL2Q9UBD3 114 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 PLXNA4Q9HCM2 1894 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 NBPF19A0A087WUL8 3843 aa-2.01□□□□□ -2.73
RNU6-542P-201ENST00000516405 MUC4Q99102 2169 aa-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 ASCC3Q8N3C0 2202 aaKnown RBP-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 A0A1B0GTI1 187 aa-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 CHEK1O14757 476 aa-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 FFAR1O14842 300 aa-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 CFLARO15519 480 aa-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 ADRB2P07550 413 aa-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 GSTA1P08263 222 aa-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 IFIT2P09913 472 aaKnown RBP-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 ZNF22P17026 224 aaPredicted RBP-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 YWHABP31946 246 aaKnown RBP-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 ACADSBP45954 432 aa-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 TNFSF10P50591 281 aa-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 RPS21P63220 83 aaKnown RBP-2.02□□□□□ -2.73
RNU6-542P-201ENST00000516405 IRF8Q02556 426 aa-2.02□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms