RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PER3P56645 1201 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 IL1RL1Q01638 556 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 PMPCAQ10713 525 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 IGFBP7Q16270 282 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 MESTQ5EB52 335 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 CLEC12AQ5QGZ9 265 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 AAED1Q7RTV5 226 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 IGFN1Q86VF2 1251 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 C20orf196Q8IYI0 205 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 DHRSXQ8N5I4 330 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 NAXEQ8NCW5 288 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 TRUB1Q8WWH5 349 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 RND1Q92730 232 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 TMEM54Q969K7 222 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 NMD3Q96D46 503 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 TXNDC15Q96J42 360 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 Q96M85 177 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 SLC38A2Q96QD8 506 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 PIGMQ9H3S5 423 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 FN3KQ9H479 309 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 RIBC2Q9H4K1 309 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 MED29Q9NX70 200 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 VSX1Q9NZR4 365 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 MALT1Q9UDY8 824 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 IL20RAQ9UHF4 553 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 PCNX1Q96RV3 2341 aa10.61□□□□□ -0.71
PDLIM5-220ENST00000514830 A0A0G2JNJ9 132 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 TEX13CA0A0J9YWL9 993 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 LOC100130705A0A1B0GUX0 176 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 PRSS37A4D1T9 235 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 ZNF726A6NNF4 738 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 RPL36A-HNRNPH2H7BZ11 118 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 CCL21O00585 134 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 XKRYO14609 159 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 SLC43A1O75387 559 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 IFNGP01579 166 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 AGAP20933 346 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 POU1F1P28069 291 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 NOS3P29474 1203 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 ACVR1BP36896 505 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 AQP4P55087 323 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 CDC42P60953 191 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 FOXF2Q12947 444 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 KRR1Q13601 381 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 ZIK1Q3SY52 487 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 SLC25A30Q5SVS4 291 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 TFAP2EQ6VUC0 442 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 C3P1Q6ZMU1 363 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 USP51Q70EK9 711 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 NUFIP2Q7Z417 695 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 GCNT2Q8N0V5 402 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 POMGNT2Q8NAT1 580 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 NPEPL1Q8NDH3 523 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 ZNF555Q8NEP9 628 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 NOXO1Q8NFA2 376 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 TFAP2CQ92754 450 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 ZNF566Q969W8 418 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 APH1AQ96BI3 265 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 STARD4Q96DR4 205 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 ADI1Q9BV57 179 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 NMNAT2Q9BZQ4 307 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 SLCO5A1Q9H2Y9 848 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 JKAMPQ9P055 326 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 Q9UFV3 132 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 HSPE1-MOB4S4R3N1 261 aa10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 USP9XQ93008 2570 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-220ENST00000514830 SLC22A23A1A5C7 686 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 RIIAD1A6NNX1 92 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 TRMUO75648 421 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 HIST1H1CP16403 213 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 CAPGP40121 348 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 CDKN2AP42771 156 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 UQCRFS1P47985 274 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 SELENOPP49908 381 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 SLC25A1P53007 311 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 RUNX1T1Q06455 604 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 ITGADQ13349 1161 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 TOP3AQ13472 1001 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 MELKQ14680 651 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 THEM4Q5T1C6 240 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 C10orf128Q5T292 105 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 TMEM236Q5W0B7 351 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 NIPAL3Q6P499 406 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 CASP12Q6UXS9 341 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 IZUMO2Q6UXV1 221 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 PTCHD4Q6ZW05 846 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 BTLAQ7Z6A9 289 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 WDFY1Q8IWB7 410 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 DEPDC4Q8N2C3 294 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 IQCF1Q8N6M8 205 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 OR8J1Q8NGP2 316 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 HDAC2Q92769 488 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 RASD2Q96D21 266 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 BOD1Q96IK1 185 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 ZNF184Q99676 751 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 EMC6Q9BV81 110 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 GLTPQ9NZD2 209 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 RAB26Q9ULW5 256 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 CLEC4AQ9UMR7 237 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms