RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PDLIM4P50479 330 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 TAS2R41P59536 307 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 SNTB2Q13425 540 aaKnown RBP9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 DAG1Q14118 895 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 KRT80Q6KB66 452 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 DEF8Q6ZN54 512 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 PIWIL3Q7Z3Z3 882 aaKnown RBP9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 NKAIN4Q8IVV8 208 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 ANKS4BQ8N8V4 417 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 PCYOX1LQ8NBM8 494 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 PFN4Q8NHR9 129 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 TMEM255BQ8WV15 326 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 LIPHQ8WWY8 451 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF566Q969W8 418 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 MS4A3Q96HJ5 214 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 SEPHS2Q99611 448 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 PIMREGQ9BSJ6 248 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 YAE1D1Q9NRH1 226 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 GLTPQ9NZD2 209 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 FBXL3Q9UKT7 428 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 PLCE1Q9P212 2302 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 LOC100653049A0A140TA62 436 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 TMEM129A0AVI4 362 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 A8MV72 311 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 SHOX2O60902 331 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 KRT34O76011 436 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 OR7A10O76100 309 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 RAB36O95755 333 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 IFNA14P01570 189 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 IGHG1P01857 330 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 HIST1H2ABP04908 130 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 IGFBP1P08833 259 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 IGHV4-31P0DP07 118 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 THRBP10828 461 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF35P13682 527 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF16P17020 682 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 USF1P22415 310 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 NR4A1P22736 598 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 KDELR2P33947 212 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 NR4A2P43354 598 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 OR1E2P47887 323 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 GIPRP48546 466 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 PTDSS1P48651 473 aaKnown RBP9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 RPL18Q07020 188 aaKnown RBP9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 PIGFQ07326 219 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 PIN1Q13526 163 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 HIST3H3Q16695 136 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 MSMPQ1L6U9 139 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 LRRC23Q53EV4 343 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 CYBRD1Q53TN4 286 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 HIST3H2AQ7L7L0 130 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 SPATA21Q7Z572 469 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 HIPK1Q86Z02 1210 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF584Q8IVC4 421 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 SKA3Q8IX90 412 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 MICU2Q8IYU8 434 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 CDK20Q8IZL9 346 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 SVOPLQ8N434 492 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 SLC22A24Q8N4F4 322 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 NOXO1Q8NFA2 376 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 OR2T12Q8NG77 320 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 TMEM239Q8WW34 195 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 HIST1H2ACQ93077 130 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 RCN3Q96D15 328 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 SGTBQ96EQ0 304 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 DOK1Q99704 481 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 VRK1Q99986 396 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 C20orf141Q9NUB4 165 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 TMEM38BQ9NVV0 291 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 TMEM160Q9NX00 188 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 CMTM6Q9NX76 183 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 ARMCX1Q9P291 453 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 RIMS3Q9UJD0 308 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 SVEP1Q4LDE5 3571 aa9.03□□□□□ -0.96
HMGXB3-205ENST00000514469 MXRA5Q9NR99 2828 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 LOC390937A0A1W2PQ73 354 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 A0A1W2PRG6 482 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 ELOVL7A1L3X0 281 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 NPIPB13A6NJU9 1138 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 CENPBD1B2RD01 187 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 NPIPB4C9JG80 1138 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 BLOC1S5-TXNDC5H3BN57 136 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 DHHO43323 396 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 ENTPD5O75356 428 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 BCL10O95999 233 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 FUT1P19526 365 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 EVX1P49640 407 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 RAB1AP62820 205 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 LSM11P83369 360 aaKnown RBP eCLIP9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 RUNX1T1Q06455 604 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 FXNQ16595 210 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 NRN1LQ496H8 165 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 LRFN4Q6PJG9 635 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 HDDC2Q7Z4H3 204 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 ARPINQ7Z6K5 226 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 POU5F2Q8N7G0 328 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 RP9Q8TA86 221 aaKnown RBP9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 FGFBP3Q8TAT2 258 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 ASB10Q8WXI3 467 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 MRPL24Q96A35 216 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms