RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 TMEM239Q8WW34 195 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 IGFBPL1Q8WX77 278 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 NANOS1Q8WY41 292 aaKnown RBP5.67□□□□□ -1.5
KDM3B-208ENST00000512928 ZNF566Q969W8 418 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 SGTBQ96EQ0 304 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 NSL1Q96IY1 281 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 COX4I2Q96KJ9 171 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 MDFIQ99750 246 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 VRK1Q99986 396 aaPredicted RBP5.67□□□□□ -1.5
KDM3B-208ENST00000512928 SLC19A3Q9BZV2 496 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 LRMDAQ9H2I8 198 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 BARX1Q9HBU1 254 aaPredicted RBP5.67□□□□□ -1.5
KDM3B-208ENST00000512928 ADA2Q9NZK5 511 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 RIMS3Q9UJD0 308 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 ZNF229Q9UJW7 825 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 PRPF19Q9UMS4 504 aaKnown RBP5.67□□□□□ -1.5
KDM3B-208ENST00000512928 MED31Q9Y3C7 131 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 V9GYQ6 96 aa5.67□□□□□ -1.5
KDM3B-208ENST00000512928 NIPBLQ6KC79 2804 aaeCLIP5.67□□□□□ -1.5
KDM3B-208ENST00000512928 ALPK2Q86TB3 2170 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 DSCAMO60469 2012 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 ZNF503-AS2A6NEH8 195 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 B2RBV5 119 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 RPL36A-HNRNPH2H7BZ11 118 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 J3KTA2 159 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 OVOL3O00110 214 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 ACOT8O14734 319 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 PIP5K1CO60331 668 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 OR7A10O76100 309 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 LYPD3O95274 346 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 BCL10O95999 233 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 SERPINA1P01009 418 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 IGHG1P01857 330 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 MT-ND1P03886 318 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 TP53P04637 393 aaPredicted RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 HEXAP06865 529 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 OR4A8P0C604 315 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 IFI30P13284 250 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 PAX1P15863 534 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 FUT1P19526 365 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 TCN1P20061 433 aaPredicted RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 PCSK6P29122 969 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 APOBEC3AP31941 199 aaPredicted RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 ARR3P36575 388 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 SERPINF1P36955 418 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 AQP2P41181 271 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 RBM34P42696 430 aaKnown RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 DAP3P51398 398 aaKnown RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 SELENOWP63302 87 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 MXRA7P84157 204 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 PPP2R2BQ00005 443 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 MYBPC1Q00872 1141 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 NAAAQ02083 359 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 GABPB1Q06547 395 aaPredicted RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 RPL18Q07020 188 aaKnown RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 ST3GAL3Q11203 375 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 ETFDHQ16134 617 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 GSG1Q2KHT4 349 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 IFI44LQ53G44 452 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 KRT80Q6KB66 452 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 CLEC2AQ6UVW9 174 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 C16orf89Q6UX73 402 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 RINLQ6ZS11 566 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 CBLL1Q75N03 491 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 TSEN54Q7Z6J9 526 aaKnown RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 DTX2Q86UW9 622 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 MYPOPQ86VE0 399 aaPredicted RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 CYP4Z1Q86W10 505 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 MEX3DQ86XN8 651 aaKnown RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 WDFY1Q8IWB7 410 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 RNF148Q8N7C7 305 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 ZNF454Q8N9F8 522 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 SYT14Q8NB59 555 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 MAGEE2Q8TD90 523 aaPredicted RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 GEMIN6Q8WXD5 167 aaKnown RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 HSH2DQ96JZ2 352 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 PRRC1Q96M27 445 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 FOXB1Q99853 325 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 PRSS27Q9BQR3 290 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 RHNO1Q9BSD3 238 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 ZNF426Q9BUY5 554 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 KATNB1Q9BVA0 655 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 FNDC11Q9BVV2 318 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 POLR2J2Q9GZM3 115 aaKnown RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 POLR2J3Q9H1A7 115 aaKnown RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 NELFAQ9H3P2 528 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 GORASP2Q9H8Y8 452 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 RNF121Q9H920 327 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 SEC61A2Q9H9S3 476 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 MOV10Q9HCE1 1003 aaKnown RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 MEPEQ9NQ76 525 aaPredicted RBP5.66□□□□□ -1.5
KDM3B-208ENST00000512928 INIPQ9NRY2 104 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 CA10Q9NS85 328 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 C20orf141Q9NUB4 165 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 TAS2R5Q9NYW4 299 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 EGFL7Q9UHF1 273 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 PMF1-BGLAPU3KQ54 211 aa5.66□□□□□ -1.5
KDM3B-208ENST00000512928 FN1P02751 2386 aaKnown RBP5.65□□□□□ -1.5
KDM3B-208ENST00000512928 TCRBV5S2A0A599 114 aa5.65□□□□□ -1.5
KDM3B-208ENST00000512928 SH3PXD2BA1X283 911 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms