RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 OR4F5Q8NH21 305 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 ELSPBP1Q96BH3 223 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 SMIM12Q96EX1 92 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 LINC00052Q96N35 136 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 OR4F4Q96R69 305 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 HSD17B14Q9BPX1 270 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 SLC26A1Q9H2B4 701 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 BOLA1Q9Y3E2 137 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 EMX2Q04743 252 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 METTL11BQ5VVY1 283 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 LIPKQ5VXJ0 399 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 BATF2Q8N1L9 274 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 FRMD1Q8N878 549 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 ZNF441Q8N8Z8 693 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 PDLIM2Q96JY6 352 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 ALG12Q9BV10 488 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 TRNAU1APQ9NX07 287 aaKnown RBP8.24□□□□□ -1.09
VCAN-208ENST00000512590 C1RLQ9NZP8 487 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 A8MT66 165 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 J3KRW8 73 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 SCAMP2O15127 329 aaKnown RBP8.24□□□□□ -1.09
VCAN-208ENST00000512590 ADAM12O43184 909 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 DNAJB5O75953 348 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 SCGB1D1O95968 90 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 CRISP2P16562 243 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 CDKN2BP42772 138 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 COL19A1Q14993 1142 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 OR13H1Q8NG92 308 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 SUN5Q8TC36 379 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 ELF4Q99607 663 aaPredicted RBP8.24□□□□□ -1.09
VCAN-208ENST00000512590 GATA5Q9BWX5 397 aaPredicted RBP8.24□□□□□ -1.09
VCAN-208ENST00000512590 SELENOIQ9C0D9 397 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 AP5S1Q9NUS5 200 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 PTBP2Q9UKA9 531 aaKnown RBP8.24□□□□□ -1.09
VCAN-208ENST00000512590 LOC100130705A0A1B0GUX0 176 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 ANTXRLA6NF34 631 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 TNFSF14O43557 240 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 UTS2O95399 124 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 OMGP23515 440 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 MARCKSL1P49006 195 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 MEF2DQ14814 521 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 SMIM21Q3B7S5 101 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 KLHDC10Q6PID8 442 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 STAC2Q6ZMT1 411 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 MS4A15Q8N5U1 240 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 CLEC4DQ8WXI8 215 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 PLA2G3Q9NZ20 509 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 SLAMF8Q9P0V8 285 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 TCRBV5S4A2TA0A5A2 114 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 TRABD2BA6NFA1 517 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 PRKRAO75569 313 aaKnown RBP8.24□□□□□ -1.09
VCAN-208ENST00000512590 HOXC4P09017 264 aaPredicted RBP8.24□□□□□ -1.09
VCAN-208ENST00000512590 FDXRP22570 491 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 C21orf58P58505 322 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 PIN1Q13526 163 aaPredicted RBP8.24□□□□□ -1.09
VCAN-208ENST00000512590 ZNF791Q3KP31 576 aaPredicted RBP8.24□□□□□ -1.09
VCAN-208ENST00000512590 SLC25A30Q5SVS4 291 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 OR8G2PQ6IF36 304 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 WDR13Q9H1Z4 485 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 EVA1AQ9H8M9 152 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 S100A14Q9HCY8 104 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 BIN3Q9NQY0 253 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 TRPM1Q7Z4N2 1603 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 ZNF816-ZNF321PA0A0X1KG74 233 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 METTL15A6NJ78 407 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 HCRTR1O43613 425 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 GCSHP23434 173 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 MFGE8Q08431 387 aaPredicted RBP8.23□□□□□ -1.09
VCAN-208ENST00000512590 TESK1Q15569 626 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 OR4D1Q15615 310 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 MICBQ29980 383 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 HIST2H3PS2Q5TEC6 136 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 OR7E24Q6IFN5 339 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 STEAP1BQ6NZ63 245 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 CPEB2Q7Z5Q1 589 aaKnown RBP8.23□□□□□ -1.09
VCAN-208ENST00000512590 DPPA2Q7Z7J5 298 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 OR52L2PQ8NGH6 319 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 OR1J1Q8NGS3 322 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 MACROD1Q9BQ69 325 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 PLK3Q9H4B4 646 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 LTB4R2Q9NPC1 389 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 FBXL4Q9UKA2 621 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 AQP12BA6NM10 295 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 HTN3P15516 51 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 CD40P25942 277 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 GNG10P50151 68 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 IDH3AP50213 366 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 INSM1Q01101 510 aaPredicted RBP8.23□□□□□ -1.09
VCAN-208ENST00000512590 NCBP2-AS2Q69YL0 99 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 PARM1Q6UWI2 310 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 Q7L0L9 218 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 AQP12AQ8IXF9 295 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 OR56B1Q8NGI3 324 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 GPBAR1Q8TDU6 330 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 TMEM239Q8WW34 195 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 RAB18Q9NP72 206 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 ASF1BQ9NVP2 202 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 TIMM10BQ9Y5J6 103 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 DCCP43146 1447 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 HPRP00739 348 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms