RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ILKQ13418 452 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 CTRB2Q6GPI1 263 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 ZNF620Q6ZNG0 422 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 MMAAQ8IVH4 418 aaKnown RBP3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 PRR22Q8IZ63 422 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 OR9G1Q8NH87 305 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 GPX8Q8TED1 209 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 PRRC1Q96M27 445 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 PLEKHF1Q96S99 279 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 NRIP2Q9BQI9 281 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 OR51J1Q9H342 316 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 SLC7A10Q9NS82 523 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 UXTQ9UBK9 157 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 MMP24Q9Y5R2 645 aa3.89□□□□□ -1.79
HMGB1P47-201ENST00000511281 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 SMCO2A6NFE2 343 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 TRDMT1O14717 391 aaKnown RBP3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 SLC31A2O15432 143 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 EIF4E2O60573 245 aaKnown RBP3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 HUS1O60921 280 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 PLEKP08567 350 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 POLR2MP0CAP2 368 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 SLC2A5P22732 501 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 SLC11A1P49279 550 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 YWHAGP61981 247 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 DOC2AQ14183 400 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 CCDC14Q49A88 953 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 BEX5Q5H9J7 111 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 PLCXD3Q63HM9 321 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 STUMQ69YW2 141 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 ZADH2Q8N4Q0 377 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 EID2Q8N6I1 236 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 C8orf31Q8N9H6 132 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 DTX3LQ8TDB6 740 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 UCN3Q969E3 161 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 TMEM54Q969K7 222 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 DUS3LQ96G46 650 aaKnown RBP3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 B3GALT6Q96L58 329 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 XPO6Q96QU8 1125 aaKnown RBP3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 SH3GL3Q99963 347 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 RARRES2Q99969 163 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 OR11A1Q9GZK7 315 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 UGT1A10Q9HAW8 530 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 MRPL22Q9NWU5 206 aaKnown RBP3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 GNPTGQ9UJJ9 305 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 SLC17A4Q9Y2C5 497 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 CNTNAP1P78357 1384 aa3.88□□□□□ -1.79
HMGB1P47-201ENST00000511281 ZNF318Q5VUA4 2279 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 ZNF726A6NNF4 738 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 MMP23AO75900 390 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 HPNP05981 417 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 CHTF8P0CG12 524 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 ICAM2P13598 275 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 CPN2P22792 545 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 GABRR1P24046 479 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 CD1BP29016 333 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 HMOX2P30519 316 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 FMO3P31513 532 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 ARFRP1Q13795 201 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 NKAIN1Q4KMZ8 207 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 AGBL2Q5U5Z8 902 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 RSBN1Q5VWQ0 802 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 TWF2Q6IBS0 349 aaKnown RBP3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 LYG1Q8N1E2 194 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 LINC00612Q8N6U2 182 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 OR9G4Q8NGQ1 327 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 C16orf74Q96GX8 76 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 TEKT3Q9BXF9 490 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 COL22A1Q8NFW1 1626 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 PLEKHG1Q9ULL1 1385 aa3.87□□□□□ -1.79
HMGB1P47-201ENST00000511281 AGRNO00468 2067 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 TRAV39A0A0B4J263 110 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 A0A0G2JLM5 398 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 KIR2DL5BA0A0G2JN68 375 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 KIR2DL5BA0A0G2JPC4 375 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 USP27XA6NNY8 438 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 E7ENQ6 273 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 BOLA2-SMG1P6H3BVE0 249 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 FGFR1OPO95684 399 aaKnown RBP3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 OTCP00480 354 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 SERPINE2P07093 398 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 TDGF1P13385 188 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 EIF2S2P20042 333 aaKnown RBP3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 BCKDHBP21953 392 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 AK4P27144 223 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 TDGF1P3P51864 188 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 DAOAP59103 153 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 IRF8Q02556 426 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 KIAA0087Q14695 138 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 ANKRD26P1Q6NSI1 321 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 TTC23LQ6PF05 361 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 IL34Q6ZMJ4 242 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 P2RY8Q86VZ1 359 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 APRG1Q8IVJ8 170 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 KIR2DL5AQ8N109 375 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 PNKDQ8N490 385 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 ZNF321PQ8N8H1 164 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 OR10G9Q8NGN4 311 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 OR1N2Q8NGR9 330 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms