RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 GATSQ8NAP1 163 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 LSM14AQ8ND56 463 aaKnown RBP12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 RCBTB1Q8NDN9 531 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 HOXB13Q92826 284 aaPredicted RBP12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 C3orf49Q96BT1 292 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 SCARF2Q96GP6 870 aaPredicted RBP12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 MOGAT1Q96PD6 335 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 SLC38A3Q99624 504 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 APMAPQ9HDC9 416 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 IFT46Q9NQC8 304 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 PRDM9Q9NQV7 894 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 STEAP1Q9UHE8 339 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 TBC1D3DA0A087WVF3 549 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 TBC1D3IA0A087WXS9 549 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 TBC1D3LB9A6J9 549 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 DNASE2O00115 360 aaPredicted RBP12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 TMEM127O75204 238 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 PLATP00750 562 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 CSTAP01040 98 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 F13BP05160 661 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 CSF1P09603 554 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 TBC1D3HP0C7X1 549 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 MAPK3P27361 379 aaPredicted RBP12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 DMWDQ09019 674 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 GPR18Q14330 331 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 TBC1D3CQ6IPX1 549 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 ANKRD16Q6P6B7 361 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 LRRC69Q6ZNQ3 347 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 RNF44Q7L0R7 432 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 TBC1D3Q8IZP1 549 aaPredicted RBP12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 PRSS35Q8N3Z0 413 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 C10orf53Q8N6V4 93 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 ZNF676Q8N7Q3 588 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 OR6K3Q8NGY3 331 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 OR2G2Q8NGZ5 317 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 OR4C3Q8NH37 302 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 C15orf40Q8WUR7 153 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 PATE1Q8WXA2 126 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 LMF2Q9BU23 707 aaKnown RBP12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 EXO5Q9H790 373 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 CACNA1IQ9P0X4 2223 aa12.2□□□□□ -0.46
SNCAIP-209ENST00000508017 TRBV5-7A0A0A0MS05 114 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 OR2W5A6NFC9 320 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 NPIPB9F8W1W9 429 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 TGFBR3LH3BV60 316 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 SNAPC5O75971 98 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 AQP8O94778 261 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 FAM122BQ7Z309 247 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 SFTPA2Q8IWL1 248 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 ZNF595Q8IYB9 648 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 EIF4E3Q8N5X7 224 aaKnown RBP12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 AMELYQ99218 206 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 POFUT1Q9H488 388 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 WDR76Q9H967 626 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 FAM74A7A6NL05 159 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 RAD1O60671 282 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 CDC123O75794 336 aaPredicted RBP12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 AKR7A3O95154 331 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 ITGA5P08648 1049 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 AKAIN1P0CW23 69 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 RPA2P15927 270 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 PRKACAP17612 351 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 CSF2RBP32927 897 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 POU3F4P49335 361 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 FNTBP49356 437 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 CTXN1P60606 82 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 GMFBP60983 142 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 PPP1CAP62136 330 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 RUNX3Q13761 415 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 ZNHIT3Q15649 155 aaPredicted RBP12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 ZNF141Q15928 474 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 FAM74A3Q4VXF1 159 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 LY6G6FQ5SQ64 297 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 CDC20BQ86Y33 519 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 PXT1Q8NFP0 134 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 OR6N2Q8NGY6 317 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 ATOH1Q92858 354 aaPredicted RBP12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 VSTM2LQ96N03 204 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 GAL3ST1Q99999 423 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 WDR13Q9H1Z4 485 aa12.19□□□□□ -0.46
SNCAIP-209ENST00000508017 COL4A2P08572 1712 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 PLRG1O43660 514 aaKnown RBP12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 ZNF254O75437 659 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 SLC35E2P0CK97 266 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 FCARP24071 287 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 KIR3DL2P43630 455 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 GRM7Q14831 915 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 DPY19L4Q7Z388 723 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 KRT77Q7Z794 578 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 CSNK1A1LQ8N752 337 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 OR9A4Q8NGU2 314 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 ST8SIA2Q92186 375 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 SLC25A28Q96A46 364 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 DNAJA3Q96EY1 480 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 GPX7Q96SL4 187 aaPredicted RBP12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 LAMP5Q9UJQ1 280 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 MRTO4Q9UKD2 239 aaKnown RBP12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 RFPL4AA6NLU0 287 aa12.18□□□□□ -0.46
SNCAIP-209ENST00000508017 RFPL4AL1F8VTS6 287 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms