RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MTPNP58546 118 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 RAB1AP62820 205 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 GALK2Q01415 458 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 CCNIQ14094 377 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 SELPLGQ14242 412 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 RAB39AQ14964 217 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 MAD2L1BPQ15013 274 aaPredicted RBP9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF74Q16587 644 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 FXNQ16595 210 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 DUSP7Q16829 419 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 CYP51A1Q16850 503 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 ENTPD8Q5MY95 495 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 LINC00114Q6XXX2 140 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 SLC35D2Q76EJ3 337 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 OR6T1Q8NGN1 323 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 VANGL1Q8TAA9 524 aaPredicted RBP9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 TMEM54Q969K7 222 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 THOC1Q96FV9 657 aaKnown RBP9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 MYEF2Q9P2K5 600 aaKnown RBP9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 FZR1Q9UM11 496 aa9.93□□□□□ -0.82
HMGCS1-204ENST00000507293 M0QX08 132 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 KPNA4O00629 521 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 LYPD3O95274 346 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 CH25HO95992 272 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 THY1P04216 161 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 TCN1P20061 433 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 SRP14P37108 136 aaKnown RBP9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 SEC24CP53992 1094 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 RPS23P62266 143 aaKnown RBP9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 RBBP4Q09028 425 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 MELKQ14680 651 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 TTMPQ5BVD1 217 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 ELFN2Q5R3F8 820 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 TTC33Q6PID6 262 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 RETREG3Q86VR2 466 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 TSPYL5Q86VY4 417 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 LRP11Q86VZ4 500 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 RBM45Q8IUH3 476 aaKnown RBP9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF584Q8IVC4 421 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 SKA3Q8IX90 412 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 LRRC17Q8N6Y2 441 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 OR4D11Q8NGI4 311 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 OR6X1Q8NH79 312 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 FGFBP3Q8TAT2 258 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 ADAMTS16Q8TE57 1224 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 DYDC1Q8WWB3 177 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 ATP6V1G3Q96LB4 118 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 CGREF1Q99674 301 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 MS4A5Q9H3V2 200 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 RABEP2Q9H5N1 569 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 DENND2DQ9H6A0 471 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 GLTPQ9NZD2 209 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 SLC7A8Q9UHI5 535 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 TMEFF2Q9UIK5 374 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 FBXL3Q9UKT7 428 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 SLC7A7Q9UM01 511 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 NDUFAF1Q9Y375 327 aa9.92□□□□□ -0.82
HMGCS1-204ENST00000507293 A0A1W2PPW3 197 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 TRAPPC13A5PLN9 417 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 ANGPT2O15123 496 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 RNF13O43567 381 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 HPXP02790 462 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 SERPINA5P05154 406 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 OR8G3PP0DMU2 310 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 CD247P20963 164 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 LSP1P33241 339 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 PCGF2P35227 344 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 GPR6P46095 362 aaPredicted RBP9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 DVL1P1P54792 670 aaPredicted RBP9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 ZP4Q12836 540 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 NFYCQ13952 458 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 LIPNQ5VXI9 398 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 UGT2A3Q6UWM9 527 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 RINLQ6ZS11 566 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 PIWIL3Q7Z3Z3 882 aaKnown RBP9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 SLC22A24Q8N4F4 322 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 DPP10Q8N608 796 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF566Q969W8 418 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 TAMM41Q96BW9 452 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 C1orf159Q96HA4 380 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF385DQ9H6B1 395 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 NARFLQ9H6Q4 476 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 NANSQ9NR45 359 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 TMEM38BQ9NVV0 291 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 TAS2R5Q9NYW4 299 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 DUSP13Q9UII6 198 aa9.91□□□□□ -0.82
HMGCS1-204ENST00000507293 HAX1O00165 279 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 DHHO43323 396 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 NCR1O76036 304 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 ASAH2BP0C7U1 165 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 FAM157BP0CG42 384 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 PGA4P0DJD7 388 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 PGA3P0DJD8 388 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 UMPSP11172 480 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 NAT2P11245 290 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 ACHEP22303 614 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 COL8A2P25067 703 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 ALKBH6Q3KRA9 238 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 REP15Q6BDI9 236 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 LRFN4Q6PJG9 635 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms