RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 JCHAINP01591 159 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 RPL3P39023 403 aaKnown RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 HMGCS1Q01581 520 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 FLOT2Q14254 428 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 TIGITQ495A1 244 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 FNBP1LQ5T0N5 605 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 SDHAF4Q5VUM1 108 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 TMEM184AQ6ZMB5 413 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 OR6V1Q8N148 313 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 TMEM151AQ8N4L1 468 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 PPFIBP2Q8ND30 876 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 SDR42E1Q8WUS8 393 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 CCDC107Q8WV48 283 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 ADTRPQ96IZ2 230 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 NIPSNAP1Q9BPW8 284 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 OSBPL11Q9BXB4 747 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 C6orf62Q9GZU0 229 aaPredicted RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 VCX3AQ9NNX9 186 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 A0A1W2PRD5 423 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 A0A1W2PRF3 423 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 A0A1W2PRM7 423 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 IGLON5A6NGN9 336 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 C2orf74A8MZ97 194 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 C21orf140B9A014 251 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 C9J4A7 227 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 UBDO15205 165 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 CDK1P06493 297 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 NQO1P15559 274 aaKnown RBP4.5□□□□□ -1.69
NIPBL-204ENST00000504430 TIMP3P35625 211 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 RPL4P36578 427 aaKnown RBP4.5□□□□□ -1.69
NIPBL-204ENST00000504430 GSK3BP49841 420 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 RAB7AP51149 207 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 DLG1Q12959 904 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 DPYSL3Q14195 570 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 MEF2DQ14814 521 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 PON3Q15166 354 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 PIK3CD-AS1Q5SR53 167 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 LRRN1Q6UXK5 716 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 FBXL14Q8N1E6 418 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 ATP6V1C2Q8NEY4 427 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 OTULINQ96BN8 352 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 WWC2-AS2Q96NR7 200 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 UGT1A8Q9HAW9 530 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 RHOFQ9HBH0 211 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 CUTCQ9NTM9 273 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 BFARQ9NZS9 450 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 TCRBV9S1A1TA0A576 114 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 GAGE12BA1L429 117 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 GAGE12HA6NDE8 117 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 G3V3Y1 287 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 K7ERI5 159 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 KPNA3O00505 521 aaPredicted RBP4.5□□□□□ -1.69
NIPBL-204ENST00000504430 SYF2O95926 243 aaKnown RBP4.5□□□□□ -1.69
NIPBL-204ENST00000504430 CD58P19256 250 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 CA4P22748 312 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 MFGE8Q08431 387 aaPredicted RBP4.5□□□□□ -1.69
NIPBL-204ENST00000504430 IL18R1Q13478 541 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 TMED2Q15363 201 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 DGUOKQ16854 277 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 RFTN2Q52LD8 501 aaPredicted RBP4.5□□□□□ -1.69
NIPBL-204ENST00000504430 COX15Q7KZN9 410 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 ASRGL1Q7L266 308 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 OR9A4Q8NGU2 314 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 OR14A16Q8NHC5 309 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 MCOLN3Q8TDD5 553 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 PIK3R3Q92569 461 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 TMEM38AQ9H6F2 299 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 EXD2Q9NVH0 621 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 DUS2Q9NX74 493 aaKnown RBP4.5□□□□□ -1.69
NIPBL-204ENST00000504430 BABAM2Q9NXR7 383 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF107Q9UII5 783 aaPredicted RBP4.5□□□□□ -1.69
NIPBL-204ENST00000504430 MTCH2Q9Y6C9 303 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 PDS5AQ29RF7 1337 aaKnown RBP4.5□□□□□ -1.69
NIPBL-204ENST00000504430 MSH6P52701 1360 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 FER1L5A0AVI2 2057 aa4.5□□□□□ -1.69
NIPBL-204ENST00000504430 FTCDNL1E5RQL4 147 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 DPM1O60762 260 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 ORM1P02763 201 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 TYMSP04818 313 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 CALB1P05937 261 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 H1F0P07305 194 aaKnown RBP4.49□□□□□ -1.69
NIPBL-204ENST00000504430 WNT2P09544 360 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 OCM2P0CE71 109 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 CSNK2A2P19784 350 aaPredicted RBP4.49□□□□□ -1.69
NIPBL-204ENST00000504430 DNA2P51530 1060 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 GAS1P54826 345 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 NTHL1P78549 312 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 OPCMLQ14982 345 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 PHKG1Q16816 387 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 DUSP7Q16829 419 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 ATP6V1FQ16864 119 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 SNAI3Q3KNW1 292 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 BTNL3Q6UXE8 466 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 SLC16A12Q6ZSM3 486 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 WDR31Q8NA23 367 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 OR51A7Q8NH64 312 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 FAM168AQ92567 244 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 UBE2E3Q969T4 207 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 TEAD3Q99594 435 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 TRIM15Q9C019 465 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms