RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 PTOV1Q86YD1 416 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 PHC2Q8IXK0 858 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 CDK20Q8IZL9 346 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 ZNF786Q8N393 782 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 DPP10Q8N608 796 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 ARIH2OSQ8N7S6 290 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 UBASH3BQ8TF42 649 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 TSPEARQ8WU66 669 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 HIST1H2ACQ93077 130 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 MAGEB18Q96M61 343 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 CGREF1Q99674 301 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 FOXB1Q99853 325 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 WFDC6Q9BQY6 131 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 COL6A5A8TX70 2615 aa10.16□□□□□ -0.78
NUDCD3-211ENST00000497978 TMEM129A0AVI4 362 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 TRAPPC13A5PLN9 417 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 HMGB1P1B2RPK0 211 aaPredicted RBP10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 LRRN3E7EW58 273 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 RNF13O43567 381 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 CH25HO95992 272 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 ADRA2AP08913 450 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 IFNGR1P15260 489 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 ZNF14P17017 642 aaPredicted RBP10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 CD247P20963 164 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 GIPRP48546 466 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 RAB1AP62820 205 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 UGT2A3Q6UWM9 527 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 NHLRC1Q6VVB1 395 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 SLC35D2Q76EJ3 337 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 PIWIL3Q7Z3Z3 882 aaKnown RBP10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 ZCCHC24Q8N2G6 241 aaKnown RBP10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 OR6T1Q8NGN1 323 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 OR6X1Q8NH79 312 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 VANGL1Q8TAA9 524 aaPredicted RBP10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 ADAMTS16Q8TE57 1224 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 RASSF5Q8WWW0 418 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 HPS1Q92902 700 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 MRPL24Q96A35 216 aaKnown RBP10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 THOC1Q96FV9 657 aaKnown RBP10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 MPP4Q96JB8 637 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 SIKE1Q9BRV8 207 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 MS4A5Q9H3V2 200 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 NANSQ9NR45 359 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 REV1Q9UBZ9 1251 aa10.15□□□□□ -0.78
NUDCD3-211ENST00000497978 MALRD1Q5VYJ5 2156 aa10.15□□□□□ -0.79
NUDCD3-211ENST00000497978 LRP5LA4QPB2 252 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 M0R233 179 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 SYNGR3O43761 229 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 FARS2O95363 451 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 TACSTD2P09758 323 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 UMPSP11172 480 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 ZNF35P13682 527 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 PCGF2P35227 344 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 GLRXP35754 106 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 ZP4Q12836 540 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 SELPLGQ14242 412 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 NPTX1Q15818 432 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 ZNF74Q16587 644 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 REP15Q6BDI9 236 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 GPR32P1Q8NGA4 272 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 OR10A6Q8NH74 314 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 TMEM54Q969K7 222 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 ZNF566Q969W8 418 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 SLC25A44Q96H78 314 aaPredicted RBP10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 MRPL37Q9BZE1 423 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 SLC19A3Q9BZV2 496 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 TPK1Q9H3S4 243 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 KAT8Q9H7Z6 458 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 NPHS2Q9NP85 383 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 GLTPQ9NZD2 209 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 ZNF229Q9UJW7 825 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 SLC7A7Q9UM01 511 aa10.14□□□□□ -0.79
NUDCD3-211ENST00000497978 FBN1P35555 2871 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 A0A0G2JND7 137 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 SLC22A23A1A5C7 686 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 KPNA4O00629 521 aaPredicted RBP10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 BCL10O95999 233 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 OR8G3PP0DMU2 310 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 APEX1P27695 318 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 CYLC2Q14093 348 aaPredicted RBP10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 RAB39AQ14964 217 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 METTL21CQ5VZV1 264 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 WDR88Q6ZMY6 472 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 IL17RELQ6ZVW7 336 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 HDXQ7Z353 690 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 DPPA2Q7Z7J5 298 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 SKA3Q8IX90 412 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 SLC22A24Q8N4F4 322 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 ZNF75AQ96N20 296 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 SNX18Q96RF0 628 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 SH3GL1Q99961 368 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 SYT3Q9BQG1 590 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 PCDHAC1Q9H158 963 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 ZNF385DQ9H6B1 395 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 TAS2R5Q9NYW4 299 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 ZNF224Q9NZL3 707 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 SLC7A8Q9UHI5 535 aa10.13□□□□□ -0.79
NUDCD3-211ENST00000497978 A0A1W2PPW3 197 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 A0A1W2PRG6 482 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 DHHO43323 396 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms