RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 NAB1Q13506 487 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 GTF2H2Q13888 395 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 RCAN2Q14206 197 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 TMEM44Q2T9K0 475 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 GGTA1PQ4G0N0 100 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 CT45A2Q5DJT8 189 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 PRAMEF8Q5VWM4 474 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 LIPJQ5W064 366 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 SLC48A1Q6P1K1 146 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 GTF2H2CQ6P1K8 395 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 KCTD18Q6PI47 426 aaPredicted RBP3.72□□□□□ -1.81
VPS52-222ENST00000495981 IL17RELQ6ZVW7 336 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 TMPRSS11FQ6ZWK6 438 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 ZNF367Q7RTV3 350 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 ZNF550Q7Z398 422 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 GGNQ86UU5 652 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 IFNEQ86WN2 208 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.72□□□□□ -1.81
VPS52-222ENST00000495981 C7orf57Q8NEG2 295 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 OR7G1Q8NGA0 311 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 RHEBL1Q8TAI7 183 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 STAG3L4Q8TBR4 150 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 ZNF675Q8TD23 568 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 STARD4Q96DR4 205 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 VSTM2LQ96N03 204 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 ZNF681Q96N22 645 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 TMEM204Q9BSN7 226 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 LRRC1Q9BTT6 524 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 FNDC11Q9BVV2 318 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 OPN3Q9H1Y3 402 aaPredicted RBP3.72□□□□□ -1.81
VPS52-222ENST00000495981 SEMA6AQ9H2E6 1030 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 SRD5A3Q9H8P0 318 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 ACTR8Q9H981 624 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 ANKRA2Q9H9E1 313 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 RNF122Q9H9V4 155 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 UBTD1Q9HAC8 227 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 NOX4Q9NPH5 578 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 ZNF701Q9NV72 531 aaPredicted RBP3.72□□□□□ -1.81
VPS52-222ENST00000495981 KLHL28Q9NXS3 571 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 NPAP1Q9NZP6 1156 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 FLRT3Q9NZU0 649 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 KLHL9Q9P2J3 617 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 PCTPQ9UKL6 214 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 RNF11Q9Y3C5 154 aa3.72□□□□□ -1.81
VPS52-222ENST00000495981 PRR14LQ5THK1 2151 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 SLC22A20A6NK97 555 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 DUXAA6NLW8 204 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 SYCE1LA8MT33 242 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 HS3ST1O14792 307 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 RAD51CO43502 376 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 TLX2O43763 284 aaPredicted RBP3.71□□□□□ -1.82
VPS52-222ENST00000495981 ICOSLGO75144 302 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 CDH16O75309 829 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 IGHV2-70P01814 119 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 CRHP06850 196 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 GSTA2P09210 222 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 NAGAP17050 411 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 PIK3R1P27986 724 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 STX2P32856 288 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 EVI2BP34910 448 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 CD79BP40259 229 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 SLC6A8P48029 635 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 STARP49675 285 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 HTR6P50406 440 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 MAPK12P53778 367 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 BRWD1-AS2P59051 145 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 CD81P60033 236 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 PHEXP78562 749 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 DLK1P80370 383 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 HTD2P86397 168 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 GUCY2DQ02846 1103 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 ZNF91Q05481 1191 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 BIKQ13323 160 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 ACKR1Q16570 336 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 CTU2Q2VPK5 515 aaKnown RBP3.71□□□□□ -1.82
VPS52-222ENST00000495981 TCHHL1Q5QJ38 904 aaPredicted RBP3.71□□□□□ -1.82
VPS52-222ENST00000495981 HIST2H2AA3Q6FI13 130 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 DNM1P46Q6ZS02 220 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 CYS1Q717R9 158 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 BTN2A1Q7KYR7 527 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 PIGWQ7Z7B1 504 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 MEX3DQ86XN8 651 aaKnown RBP3.71□□□□□ -1.82
VPS52-222ENST00000495981 PLCZ1Q86YW0 608 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 GRAMD2AQ8IUY3 354 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 SERPINA12Q8IW75 414 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 METTL4Q8N3J2 472 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 GBP7Q8N8V2 638 aaPredicted RBP3.71□□□□□ -1.82
VPS52-222ENST00000495981 OR2M3Q8NG83 312 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 OR52R1Q8NGF1 315 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 OR5M8Q8NGP6 311 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 OR1J4Q8NGS1 313 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 OR9A2Q8NGT5 310 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 FBXO25Q8TCJ0 367 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 FIG4Q92562 907 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 CDKL2Q92772 493 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 TMBIM1Q969X1 311 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 MOB3AQ96BX8 217 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 C11orf24Q96F05 449 aaPredicted RBP3.71□□□□□ -1.82
VPS52-222ENST00000495981 PIK3IP1Q96FE7 263 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 C5orf30Q96GV9 206 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms