RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 FAM91A1Q658Y4 838 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 NANOGP8Q6NSW7 305 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 SLC35D2Q76EJ3 337 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 IGFN1Q86VF2 1251 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 KRT73Q86Y46 540 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 MICU2Q8IYU8 434 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 C11orf65Q8NCR3 313 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 OR5J2Q8NH18 312 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 TMEM255BQ8WV15 326 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 DNAJA4Q8WW22 397 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-211ENST00000491581 PROX1Q92786 737 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 TMEM54Q969K7 222 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 MAGEB18Q96M61 343 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 FOXB1Q99853 325 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 ASPNQ9BXN1 380 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 NANOGQ9H9S0 305 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 C12orf10Q9HB07 376 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 DYNLRB1Q9NP97 96 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 MRPL39Q9NYK5 338 aaKnown RBP7.66□□□□□ -1.18
HDAC3-211ENST00000491581 TREM2Q9NZC2 230 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 ANGPT4Q9Y264 503 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 SH3GLB1Q9Y371 365 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 SNX13Q9Y5W8 968 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 GMEB1Q9Y692 573 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 CACNG2Q9Y698 323 aa7.66□□□□□ -1.18
HDAC3-211ENST00000491581 LOC102725191A0A1B0GVB3 256 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 ZNF726A6NNF4 738 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 FAM157AC9JC47 383 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 BLOC1S5-TXNDC5H3BN57 136 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 J3KTA2 159 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 ANGPT2O15123 496 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 RNF13O43567 381 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 CHP2O43745 196 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 OR2T1O43869 369 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 SLC2A10O95528 541 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 UMPSP11172 480 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 NR4A1P22736 598 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 ARR3P36575 388 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 AQP2P41181 271 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 CSNK1A1P48729 337 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 PPOXP50336 477 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 DSCR9P59020 149 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 PIN1Q13526 163 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-211ENST00000491581 LAPTM4AQ15012 233 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 ZSWIM7Q19AV6 140 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 CR1LQ2VPA4 569 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 REP15Q6BDI9 236 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 PODNL1Q6PEZ8 512 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 DEF8Q6ZN54 512 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 NET1Q7Z628 596 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-211ENST00000491581 RANBP3LQ86VV4 465 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-211ENST00000491581 LRRC18Q8N456 261 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 DPP10Q8N608 796 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 POU5F2Q8N7G0 328 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 NUP37Q8NFH4 326 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 OR4K5Q8NGD3 323 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 SLC35B4Q969S0 331 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 ZNF607Q96SK3 696 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 TMEM43Q9BTV4 400 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 SPATA5L1Q9BVQ7 753 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 SHARPINQ9H0F6 387 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 OBP2BQ9NPH6 170 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 RHCGQ9UBD6 479 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 DUSP13Q9UII6 198 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 SLC13A4Q9UKG4 626 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 POFUT2Q9Y2G5 429 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 FKBP7Q9Y680 259 aa7.65□□□□□ -1.18
HDAC3-211ENST00000491581 LOC100653049A0A140TA62 436 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 LOC390937A0A1W2PQ73 354 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 IMPA2O14732 288 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 CDC14BO60729 498 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 SERPINB7O75635 380 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 KRT34O76011 436 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 SCG5P05408 212 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 QDPRP09417 244 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 ASAH2BP0C7U1 165 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 PGA4P0DJD7 388 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 PGA3P0DJD8 388 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 H2AFXP16104 143 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-211ENST00000491581 ZNF23P17027 643 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 PPIBP23284 216 aaKnown RBP7.64□□□□□ -1.19
HDAC3-211ENST00000491581 APEX1P27695 318 aaKnown RBP7.64□□□□□ -1.19
HDAC3-211ENST00000491581 PCGF2P35227 344 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 SH3BGRP55822 239 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-211ENST00000491581 RPL18Q07020 188 aaKnown RBP7.64□□□□□ -1.19
HDAC3-211ENST00000491581 KLF10Q13118 480 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 RIN1Q13671 783 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 FXNQ16595 210 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 VMACQ2NL98 169 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 TRMT5Q32P41 509 aaKnown RBP7.64□□□□□ -1.19
HDAC3-211ENST00000491581 SPATA46Q5T0L3 261 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 AVPI1Q5T686 147 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 FAM166AQ6J272 317 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 ZNF613Q6PF04 617 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 TTC33Q6PID6 262 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-211ENST00000491581 RINLQ6ZS11 566 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 SSX8Q7RTT4 187 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 PXKQ7Z7A4 578 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 SNX32Q86XE0 403 aa7.64□□□□□ -1.19
HDAC3-211ENST00000491581 CALHM3Q86XJ0 350 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms