RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ZNF670Q9BS34 389 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 CNPY3Q9BT09 278 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 PANK2Q9BZ23 570 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 API5Q9BZZ5 524 aaKnown RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 ILKAPQ9H0C8 392 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 NXF3Q9H4D5 531 aaKnown RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 UCK1Q9HA47 277 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 Q9HAA7 133 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 ACP6Q9NPH0 428 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 AGPAT4Q9NRZ5 378 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 LSM7Q9UK45 103 aaKnown RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 POU2F3Q9UKI9 436 aa2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 ELF5Q9UKW6 265 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.63□□□□□ -1.99
DEPDC1-204ENST00000489862 AK9Q5TCS8 1911 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 DICER1Q9UPY3 1922 aaKnown RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 A0A1B0GUL6 1792 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 TRBV9A0A0B4J1U6 114 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 hCG_38984A0A1B0GV85 526 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 GSTTP1A0A1W2PQM5 241 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 NEDD8-MDP1E9PL57 170 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 F5H6K3 240 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 COCHO43405 550 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 SYNGR3O43761 229 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 PFKFB2O60825 505 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 HUS1O60921 280 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 CTRB1P17538 263 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 SYT1P21579 422 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 ATP5A1P25705 553 aaKnown RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 PRDX3P30048 256 aaKnown RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 HMOX2P30519 316 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 CEACAM8P31997 349 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 SPAM1P38567 509 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 KCNJ3P48549 501 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 MLF1P58340 268 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 RAB10P61026 200 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 TIMM10P62072 90 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 CSNK1G2P78368 415 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 RBBP4Q09028 425 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 GPR17Q13304 367 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 TRAM2Q15035 370 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 HLA-BQ31612 363 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 TECRLQ5HYJ1 363 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF691Q5VV52 312 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 CTRB2Q6GPI1 263 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF621Q6ZSS3 439 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC25A48Q6ZT89 311 aaKnown RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 APTXQ7Z2E3 356 aaKnown RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 LRRC6Q86X45 466 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 KRT222Q8N1A0 295 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 ARHGAP18Q8N392 663 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 FBXL13Q8NEE6 735 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 OR8J2Q8NGG1 315 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 OR1S2Q8NGQ3 325 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 C11orf45Q8TAV5 145 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 PHOSPHO2Q8TCD6 241 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 HPSE2Q8WWQ2 592 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 FCAMRQ8WWV6 532 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 TM9SF4Q92544 642 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 CIDECQ96AQ7 238 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 NUS1Q96E22 293 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF486Q96H40 463 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 NSL1Q96IY1 281 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 GLT1D1Q96MS3 346 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF578Q96N58 590 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 DUX3Q96PT4 197 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 NAT9Q9BTE0 207 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 ANGPTL4Q9BY76 406 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 PSTPIP2Q9H939 334 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 CD209Q9NNX6 404 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 UBE2TQ9NPD8 197 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 ESM1Q9NQ30 184 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 OR2S2Q9NQN1 319 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 CUTCQ9NTM9 273 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 GPATCH2LQ9NWQ4 482 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 TAAR2Q9P1P5 351 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 C19orf25Q9UFG5 118 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 MAN1B1Q9UKM7 699 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 DDX19BQ9UMR2 479 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC17A4Q9Y2C5 497 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 NTNG1Q9Y2I2 539 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 KCNIP3Q9Y2W7 256 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 CBY1Q9Y3M2 126 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 OARD1Q9Y530 152 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 SPEF2Q9C093 1822 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 MYH3P11055 1940 aa2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 COL1A1P02452 1464 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1-204ENST00000489862 IGLV3-22A0A075B6J6 115 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 TRBV5-4A0A0C4DH59 114 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 C1orf232A0A0U1RR37 186 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 A0A1B0GW55 424 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 A0A1W2PS18 150 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 TCRBV9S1A1TA0A576 114 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 FAM231BA6NCW3 169 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 FABP12A6NFH5 140 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 NPIPB9F8W1W9 429 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 G3V2L1 256 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 PRAMEF26H0Y7S4 382 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 TOR1AO14656 332 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ITGB1BP1O14713 200 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms