RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 GSSP48637 474 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 CLRN1P58418 232 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 FOXD4Q12950 439 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-212ENST00000489728 TSPAN31Q12999 210 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 LAPTM4AQ15012 233 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 TSC22D1Q15714 1073 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 FBXW10Q5XX13 1052 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 GPR139Q6DWJ6 353 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 ZNF770Q6IQ21 691 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-212ENST00000489728 SMARCD3Q6STE5 483 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 KLHL17Q6TDP4 642 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 C22orf34Q6ZV56 151 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 LINGO2Q7L985 606 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 YTHDF3Q7Z739 585 aaKnown RBP9.72□□□□□ -0.85
CPSF7-212ENST00000489728 LRRC75AQ8NAA5 344 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 OR51A7Q8NH64 312 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 ZNF519Q8TB69 540 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 GNPDA2Q8TDQ7 276 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 BCL2L2Q92843 193 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-212ENST00000489728 ZC3HAV1LQ96H79 300 aaKnown RBP9.72□□□□□ -0.85
CPSF7-212ENST00000489728 RADILQ96JH8 1075 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 LURAP1Q96LR2 239 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 TMEM204Q9BSN7 226 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 ALG12Q9BV10 488 aa9.72□□□□□ -0.85
CPSF7-212ENST00000489728 DENND2DQ9H6A0 471 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-212ENST00000489728 CCM2LQ9NUG4 571 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-212ENST00000489728 M0R3G1 203 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 SIAH2O43255 324 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 FKBP6O75344 327 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 CCNB2O95067 398 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 GSTM3P21266 225 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 LOXP28300 417 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-212ENST00000489728 SDHAP31040 664 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 RPL4P36578 427 aaKnown RBP9.71□□□□□ -0.86
CPSF7-212ENST00000489728 FOXG1P55316 489 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-212ENST00000489728 CTXN1P60606 82 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 UBE2NP61088 152 aaKnown RBP9.71□□□□□ -0.86
CPSF7-212ENST00000489728 CBX1P83916 185 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 LGALS3BPQ08380 585 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 CAMK2DQ13557 499 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 MELKQ14680 651 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 MICAQ29983 383 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 CEACAM16Q2WEN9 425 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 TBRG1Q3YBR2 411 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 NCMAPQ5T1S8 102 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 C10orf128Q5T292 105 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 C1orf146Q5VVC0 180 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 CARD17Q5XLA6 110 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 PGBD2Q6P3X8 592 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 TMEM108Q6UXF1 575 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 DPY19L2P2Q6ZN68 376 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 FAM122BQ7Z309 247 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 DPPA2Q7Z7J5 298 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 ZER1Q7Z7L7 766 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 ADCK1Q86TW2 530 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 WFDC8Q8IUA0 241 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 CLDN22Q8N7P3 220 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 ARIH2OSQ8N7S6 290 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 FANK1Q8TC84 345 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 DUS3LQ96G46 650 aaKnown RBP9.71□□□□□ -0.86
CPSF7-212ENST00000489728 TNFRSF13CQ96RJ3 184 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 KCNK17Q96T54 332 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 DGCR6LQ9BY27 220 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 NRIP3Q9NQ35 241 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 GRHPRQ9UBQ7 328 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 DNAJB9Q9UBS3 223 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 FBXL3Q9UKT7 428 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 MGAT4BQ9UQ53 548 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 SAMHD1Q9Y3Z3 626 aaKnown RBP9.71□□□□□ -0.86
CPSF7-212ENST00000489728 ABCA12Q86UK0 2595 aa9.71□□□□□ -0.86
CPSF7-212ENST00000489728 XKRYO14609 159 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 IMPA2O14732 288 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 DHHO43323 396 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 IDH3BO43837 385 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 DEAF1O75398 565 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-212ENST00000489728 TRMUO75648 421 aaKnown RBP9.7□□□□□ -0.86
CPSF7-212ENST00000489728 TXNDC12O95881 172 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 FCGR1AP12314 374 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 ZNF26P17031 533 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-212ENST00000489728 PTAFRP25105 342 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 SLC6A6P31641 620 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 ZNF84P51523 738 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 RPS6KA3P51812 740 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 ARF1P84077 181 aaKnown RBP9.7□□□□□ -0.86
CPSF7-212ENST00000489728 PHYHD1Q5SRE7 291 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 THEM4Q5T1C6 240 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 C9orf135Q5VTT2 229 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 ADAM5Q6NVV9 412 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 CD300LDQ6UXZ3 194 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 ZNF620Q6ZNG0 422 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 CDC20BQ86Y33 519 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 C10orf67Q8IYJ2 551 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 WDR31Q8NA23 367 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 NANOS1Q8WY41 292 aaKnown RBP9.7□□□□□ -0.86
CPSF7-212ENST00000489728 NINJ1Q92982 152 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 NMD3Q96D46 503 aaKnown RBP9.7□□□□□ -0.86
CPSF7-212ENST00000489728 NRBF2Q96F24 287 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 PIK3IP1Q96FE7 263 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 PLPPR2Q96GM1 343 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 ZNF570Q96NI8 536 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms