RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 ADRB1P08588 477 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 CD63P08962 238 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 CLUP10909 449 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 PSMB1P20618 241 aaKnown RBP8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 MAKP20794 623 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 PYCR1P32322 319 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 NRG3P56975 720 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 FXYD6P3P58550 94 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 DHODHQ02127 395 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 RIPPLY1Q0D2K3 151 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 NSDHLQ15738 373 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 ISXQ2M1V0 245 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 EXOSC6Q5RKV6 272 aaKnown RBP8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 METTL11BQ5VVY1 283 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 DMKNQ6E0U4 476 aaPredicted RBP8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 SLC25A25Q6KCM7 469 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 BAIAP2L2Q6UXY1 529 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 TFAP2EQ6VUC0 442 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 SHISA6Q6ZSJ9 500 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 COX15Q7KZN9 410 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 LINGO2Q7L985 606 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 OVCH2Q7RTZ1 564 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 CMTM4Q8IZR5 234 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 STPG2Q8N412 459 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 TEX19Q8NA77 164 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 FAM98AQ8NCA5 519 aaKnown RBP8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 FAM71CQ8NEG0 241 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 OR52R1Q8NGF1 315 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 ZNF671Q8TAW3 534 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 FANK1Q8TC84 345 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 BRIX1Q8TDN6 353 aaKnown RBP8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 SMPDL3BQ92485 455 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 HOXB13Q92826 284 aaPredicted RBP8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 TSLPQ969D9 159 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 SGTBQ96EQ0 304 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 DDA1Q9BW61 102 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 NANSQ9NR45 359 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 INPP5EQ9NRR6 644 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 DUSP22Q9NRW4 184 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 ZNF275Q9NSD4 429 aaPredicted RBP8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 SLC39A1Q9NY26 324 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 CTSFQ9UBX1 484 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 ZNF69Q9UC07 566 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 ING1Q9UK53 422 aaPredicted RBP8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 NXT1Q9UKK6 140 aaKnown RBP8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 ERVK-19Q9WJR5 959 aa8.2□□□□□ -1.1
EXOSC1-211ENST00000489158 WDFY3Q8IZQ1 3526 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 TRAV1-2A0A0B4J238 106 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 A0A1B0GUH1 482 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 TCRBV16S1A1N1A0A5B0 115 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 MCRIP1C9JLW8 97 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 PRR23D1E9PI22 279 aaPredicted RBP8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 BHLHE40O14503 412 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 CTDSPLO15194 276 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 MAGEB4O15481 346 aaPredicted RBP8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 PRAMEF2O60811 474 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 TPPPO94811 219 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 KLK3P07288 261 aaPredicted RBP8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 NMBP08949 121 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 PRR23D2P0DMB1 279 aaPredicted RBP8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 PRG2P13727 222 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 NFYAP23511 347 aaPredicted RBP8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 PRKAR1BP31321 381 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 HCCSP53701 268 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 CLDN6P56747 220 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 TAS2R43P59537 309 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 PSMA6P60900 246 aaKnown RBP8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 FUT7Q11130 342 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 TRIP6Q15654 476 aaKnown RBP8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 ELAVL1Q15717 326 aaKnown RBP8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 DCAF12Q5T6F0 453 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 FAM69AQ5T7M9 428 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 OR5M10Q6IEU7 315 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 ALKAL2Q6UX46 152 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 SSX6Q7RTT6 188 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 OVCH1Q7RTY7 1134 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 OR52L1Q8NGH7 329 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 OR52I2Q8NH67 350 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 OR14A16Q8NHC5 309 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 PFN4Q8NHR9 129 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 LGALS14Q8TCE9 139 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 STT3BQ8TCJ2 826 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 CDS1Q92903 461 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 LCORQ96JN0 433 aaPredicted RBP8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 HS6ST2Q96MM7 605 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 FN3KQ9H479 309 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 WDR54Q9H977 334 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 ADGRL4Q9HBW9 690 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 RABL2AQ9UBK7 228 aaPredicted RBP8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 PFDN2Q9UHV9 154 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 LOXL2Q9Y4K0 774 aa8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 PCDHGA9Q9Y5G4 932 aaKnown RBP8.19□□□□□ -1.1
EXOSC1-211ENST00000489158 CCDC187A0A096LP49 1063 aa8.18□□□□□ -1.1
EXOSC1-211ENST00000489158 SLC22A31A6NKX4 558 aa8.18□□□□□ -1.1
EXOSC1-211ENST00000489158 VSTM2BA6NLU5 285 aa8.18□□□□□ -1.1
EXOSC1-211ENST00000489158 C17orf105B2RV13 164 aa8.18□□□□□ -1.1
EXOSC1-211ENST00000489158 KRBOX1C9JBD0 128 aa8.18□□□□□ -1.1
EXOSC1-211ENST00000489158 STX11O75558 287 aa8.18□□□□□ -1.1
EXOSC1-211ENST00000489158 GATBO75879 557 aaKnown RBP8.18□□□□□ -1.1
EXOSC1-211ENST00000489158 DKK1O94907 266 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms