RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 CBLN3Q6UW01 205 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 ARSKQ6UWY0 536 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 Q6ZPB1 254 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 HMGN2P46Q86SG4 172 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 DHFR2Q86XF0 187 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 VRK2Q86Y07 508 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 ARMC8Q8IUR7 673 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 GTPBP8Q8N3Z3 284 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 OR2T12Q8NG77 320 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 OR5M9Q8NGP3 310 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 GPR119Q8TDV5 335 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 ST8SIA1Q92185 356 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 AKAP1Q92667 903 aaKnown RBP eCLIP7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 POP5Q969H6 163 aaKnown RBP7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 SLC35B4Q969S0 331 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 ZG16BQ96DA0 208 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 ARSGQ96EG1 525 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 UGT2B28Q9BY64 529 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 SERINC1Q9NRX5 453 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 MED17Q9NVC6 651 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 C6orf203Q9P0P8 240 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 SPRR3Q9UBC9 169 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 ABCD2Q9UBJ2 740 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 CD300AQ9UGN4 299 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 ICAM5Q9UMF0 924 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 ZNF835Q9Y2P0 537 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 SPIN1Q9Y657 262 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 AP4B1Q9Y6B7 739 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 DSPPQ9NZW4 1301 aa7.18□□□□□ -1.26
TRAPPC12-221ENST00000489032 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 OR2M5A3KFT3 312 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 M0QX08 132 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 CCL21O00585 134 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 ACOT8O14734 319 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 WISP2O76076 250 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 ELK4P28324 431 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 SRYQ05066 204 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 LIPEQ05469 1076 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 CRYZQ08257 329 aaKnown RBP7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 SKP2Q13309 424 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 QPRTQ15274 297 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 MAPK11Q15759 364 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 C3AR1Q16581 482 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 PLPPR5Q32ZL2 321 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 NDUFAF6Q330K2 333 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 PDSS1Q5T2R2 415 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 DHRS4L2Q6PKH6 230 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 ZNF836Q6ZNA1 936 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 SPATA24Q86W54 205 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 CALHM3Q86XJ0 350 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 PTOV1Q86YD1 416 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 DOLPP1Q86YN1 238 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 GRAMD2AQ8IUY3 354 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 MICU2Q8IYU8 434 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 C10orf111Q8N326 155 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 FAM71CQ8NEG0 241 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 OR5M1Q8NGP8 315 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 SMPDL3BQ92485 455 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 CNOT9Q92600 299 aaKnown RBP7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 NPIPB3Q92617 1050 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 RNF145Q96MT1 663 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 KCTD14Q9BQ13 255 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 PINK1Q9BXM7 581 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 TRIM2Q9C040 744 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 PNPLA3Q9NST1 481 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 CMTM6Q9NX76 183 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 PAQR5Q9NXK6 330 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 GAR1Q9NY12 217 aaKnown RBP7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 SELENONQ9NZV5 590 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 RPS6KB2Q9UBS0 482 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 TINAGQ9UJW2 476 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 LRRC42Q9Y546 428 aa7.17□□□□□ -1.26
TRAPPC12-221ENST00000489032 FAM90A18PA6NE21 464 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 FAM90A16PA6NEW6 464 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 CLDN24A6NM45 220 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 FAM90A9PA6NNJ1 464 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 FAM90A5PA8MXJ8 464 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 FAAHO00519 579 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 ZNHIT1O43257 154 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 SEC14L5O43304 696 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 MFN2O95140 757 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 FAM90A15PP0C7V4 464 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 FAM90A14PP0C7W9 464 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 CPN1P15169 458 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 HOXB6P17509 224 aaKnown RBP7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 TCN1P20061 433 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 FKBP2P26885 142 aaKnown RBP7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 APOBEC1P41238 236 aaKnown RBP7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 PCP4P48539 62 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 IDH2P48735 452 aaKnown RBP7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 LHX2P50458 406 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 SMSP52788 366 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 RGS8P57771 180 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 B3GALT5-AS1P59052 145 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 EEF1A1P68104 462 aaKnown RBP7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 MS4A2Q01362 244 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 COL10A1Q03692 680 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 MERTKQ12866 999 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 EPS8Q12929 822 aa7.16□□□□□ -1.26
TRAPPC12-221ENST00000489032 FOXF1Q12946 379 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms