RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 DYNLRB1Q9NP97 96 aa11.29□□□□□ -0.6
ATPAF2-207ENST00000488753 MED4Q9NPJ6 270 aa11.29□□□□□ -0.6
ATPAF2-207ENST00000488753 TAS2R5Q9NYW4 299 aa11.29□□□□□ -0.6
ATPAF2-207ENST00000488753 ZNF229Q9UJW7 825 aa11.29□□□□□ -0.6
ATPAF2-207ENST00000488753 KCNS2Q9ULS6 477 aa11.29□□□□□ -0.6
ATPAF2-207ENST00000488753 SLC7A7Q9UM01 511 aa11.29□□□□□ -0.6
ATPAF2-207ENST00000488753 MXRA5Q9NR99 2828 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 IGHV4-61A0A0C4DH41 118 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 C11orf98E9PRG8 122 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 STAMBPO95630 424 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 RAB36O95755 333 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 CH25HO95992 272 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 IGF2P01344 180 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 HIST1H2ABP04908 130 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 ASAH2BP0C7U1 165 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 DAOP14920 347 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 GLRXP35754 106 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 BIDP55957 195 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 RPS23P62266 143 aaKnown RBP11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 RAB1AP62820 205 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 CARTPTQ16568 116 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 NRN1LQ496H8 165 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 IQCCQ4KMZ1 466 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 KRT80Q6KB66 452 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 HIST3H2AQ7L7L0 130 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 DPPA2Q7Z7J5 298 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 WDFY1Q8IWB7 410 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 ZNF786Q8N393 782 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 OR8J3Q8NGG0 315 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 OR4D11Q8NGI4 311 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 VANGL1Q8TAA9 524 aaPredicted RBP11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 TMEM158Q8WZ71 300 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 HPS1Q92902 700 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 HIST1H2ACQ93077 130 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 TMEM54Q969K7 222 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 ZNF566Q969W8 418 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 MRPL24Q96A35 216 aaKnown RBP11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 MSI2Q96DH6 328 aaKnown RBP11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 POLR2J2Q9GZM3 115 aaKnown RBP11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 POLR2J3Q9H1A7 115 aaKnown RBP11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 ZNF446Q9NWS9 450 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 GLTPQ9NZD2 209 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 ZNF224Q9NZL3 707 aa11.28□□□□□ -0.6
ATPAF2-207ENST00000488753 LOC100289279A0A1B0GTE1 492 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 RNF212BA8MTL3 300 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 BBIP1A8MTZ0 92 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 CENPBD1B2RD01 187 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 FBP2O00757 339 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 ATP8B1O43520 1251 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 RNF13O43567 381 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 SYNGR3O43761 229 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 SERPINI2O75830 405 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 IFNA14P01570 189 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 SERPINA5P05154 406 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 TACSTD2P09758 323 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 TROVE2P10155 538 aaKnown RBP eCLIP11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 RBM34P42696 430 aaKnown RBP11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 GIPRP48546 466 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 PTDSS1P48651 473 aaKnown RBP11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 CRYBA2P53672 197 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 GALK2Q01415 458 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 PIGFQ07326 219 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 FXNQ16595 210 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 NANOGP8Q6NSW7 305 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 ERICH5Q6P6B1 374 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 UGT2A3Q6UWM9 527 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 TSPYL5Q86VY4 417 aaPredicted RBP11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 CALHM3Q86XJ0 350 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 RBM45Q8IUH3 476 aaKnown RBP11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 CDK20Q8IZL9 346 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 LRRC58Q96CX6 371 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 MS4A5Q9H3V2 200 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 NANOGQ9H9S0 305 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 SLC7A8Q9UHI5 535 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 BAG5Q9UL15 447 aa11.27□□□□□ -0.61
ATPAF2-207ENST00000488753 SLC22A23A1A5C7 686 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 M0R233 179 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 FXYD1O00168 92 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 DHHO43323 396 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 MGRN1O60291 552 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 FARS2O95363 451 aaKnown RBP11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 BCL10O95999 233 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 IGHG1P01857 330 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 MT-ND1P03886 318 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 IGFBP1P08833 259 aaPredicted RBP11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 PGA4P0DJD7 388 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 PGA3P0DJD8 388 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 OR8G3PP0DMU2 310 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 HNF1AP20823 631 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 IGFBP5P24593 272 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 LSP1P33241 339 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 CHN2P52757 468 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 MAPRE2Q15555 327 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 GKAP1Q5VSY0 366 aaPredicted RBP11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 REP15Q6BDI9 236 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 LRFN4Q6PJG9 635 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 HDDC2Q7Z4H3 204 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 SKA3Q8IX90 412 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 SLC22A24Q8N4F4 322 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms