RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 TBXA2RP21731 343 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 MPZP25189 248 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 DPP4P27487 766 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 NDUFS1P28331 727 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 GABRR2P28476 465 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 TIA1P31483 386 aaKnown RBP eCLIP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 DCTDP32321 178 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 DLSTP36957 453 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 LSM6P62312 80 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 PPP2CBP62714 309 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 PPP2CAP67775 309 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 TNFRSF9Q07011 255 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 CBFBQ13951 182 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 COTL1Q14019 142 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 TEAD2Q15562 447 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ZXDCQ2QGD7 858 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ALG11Q2TAA5 492 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 PGGHGQ32M88 737 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ZNF750Q32MQ0 723 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ACSM3Q53FZ2 586 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 RNASE10Q5GAN6 216 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 NCMAPQ5T1S8 102 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 PTRHD1Q6GMV3 140 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ENPP7Q6UWV6 458 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 TAS1R1Q7RTX1 841 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 IQCHQ86VS3 1027 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 FBXO16Q8IX29 292 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 KLHDC8AQ8IYD2 350 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 BEST3Q8N1M1 668 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 PAQR4Q8N4S7 273 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR5AP2Q8NGF4 316 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR56B1Q8NGI3 324 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR4D11Q8NGI4 311 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR6T1Q8NGN1 323 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR4Q3Q8NH05 313 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 CCDC107Q8WV48 283 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 SLC22A18Q96BI1 424 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 C3orf49Q96BT1 292 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 S100PBPQ96BU1 408 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 PPCDCQ96CD2 204 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 PRRC1Q96M27 445 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 NOL4LQ96MY1 436 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 LRFN5Q96NI6 719 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 NDC1Q9BTX1 674 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 NDUFAF3Q9BU61 184 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 TMEM39BQ9GZU3 492 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 EGLN3Q9H6Z9 239 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 CNTD2Q9H8S5 307 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 BCO1Q9HAY6 547 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 RHOFQ9HBH0 211 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 SEMA4GQ9NTN9 838 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 TAS2R8Q9NYW2 309 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 CALML5Q9NZT1 146 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 MRPL15Q9P015 296 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 KLK11Q9UBX7 282 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 FOXJ3Q9UPW0 622 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 MOKQ9UQ07 419 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ZNF337Q9Y3M9 751 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 FLVCR1Q9Y5Y0 555 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 A0A087WUJ7 227 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 A0A0A6YYC8 382 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 A0A1W2PPH5 198 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 MYBPHLA2RUH7 354 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 MGAT4DA6NG13 374 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR2AT4A6NND4 320 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 H7C1Q1 480 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 H7C417 338 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 I3L1I5 382 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ADAM10O14672 748 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR10H2O60403 315 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 MED6O75586 246 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 CRTAPO75718 401 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 FARS2O95363 451 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 PPP1R3DO95685 299 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 C8GP07360 202 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 FCGR3AP08637 254 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 CSF1P09603 554 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR8G3PP0DMU2 310 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 CALCBP10092 127 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 CD22P20273 847 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 HOXD9P28356 352 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ATP6V1E1P36543 226 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 IFNGR2P38484 337 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 SLC6A9P48067 706 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 RGS19P49795 217 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 LGALS4P56470 323 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 RGS8P57771 180 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 SSBP1Q04837 148 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ZNF763Q0D2J5 394 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ZNF177Q13360 481 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 GAMTQ14353 236 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 RBM39Q14498 530 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 GPNMBQ14956 572 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 RHEBQ15382 184 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 SURF2Q15527 256 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR8G1Q15617 311 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ELAVL1Q15717 326 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 LIPNQ5VXI9 398 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms