RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 RIMS3Q9UJD0 308 aa10.65□□□□□ -0.7
OPTN-212ENST00000487935 A4GNTQ9UNA3 340 aa10.65□□□□□ -0.7
OPTN-212ENST00000487935 MOKQ9UQ07 419 aa10.65□□□□□ -0.7
OPTN-212ENST00000487935 FKBP7Q9Y680 259 aa10.65□□□□□ -0.7
OPTN-212ENST00000487935 SONP18583 2426 aaKnown RBP10.65□□□□□ -0.71
OPTN-212ENST00000487935 TCRBV3S1A0A5B6 114 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 A8MVM7 634 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 ATP6V1G2-DDX39BF2Z307 99 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 PHF1O43189 567 aaPredicted RBP10.64□□□□□ -0.71
OPTN-212ENST00000487935 THY1P04216 161 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 H1F0P07305 194 aaKnown RBP10.64□□□□□ -0.71
OPTN-212ENST00000487935 IGHV4-31P0DP07 118 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 RAP2AP10114 183 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 THRBP10828 461 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 UMPSP11172 480 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 RHCEP18577 417 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 PAX7P23759 505 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 PDLIM4P50479 330 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 LSM11P83369 360 aaKnown RBP eCLIP10.64□□□□□ -0.71
OPTN-212ENST00000487935 SPIBQ01892 262 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 CCNIQ14094 377 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 SWI5Q1ZZU3 235 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 HIKESHIQ53FT3 197 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 FGD3Q5JSP0 725 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 CANT1Q8WVQ1 401 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 NANOS1Q8WY41 292 aaKnown RBP10.64□□□□□ -0.71
OPTN-212ENST00000487935 SLC38A4Q969I6 547 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 FBXO17Q96EF6 278 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 MPP4Q96JB8 637 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 C7orf34Q96L11 122 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 KCNS3Q9BQ31 491 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 IL1RAPQ9NPH3 570 aa10.64□□□□□ -0.71
OPTN-212ENST00000487935 ALPK2Q86TB3 2170 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 COL6A5A8TX70 2615 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 IGKV1D-42A0A075B6H8 117 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 A0A087WUJ7 227 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 ANKRD65E5RJM6 399 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 ZNF587BE7ETH6 402 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 NDUFS8O00217 210 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 KPNA4O00629 521 aaPredicted RBP10.63□□□□□ -0.71
OPTN-212ENST00000487935 FFAR1O14842 300 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 LMX1BO60663 402 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 LY6HO94772 140 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 VAMP5O95183 116 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 LYPD3O95274 346 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 ZNF16P17020 682 aaPredicted RBP10.63□□□□□ -0.71
OPTN-212ENST00000487935 GZMKP49863 264 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 KPNB1Q14974 876 aaKnown RBP10.63□□□□□ -0.71
OPTN-212ENST00000487935 TRAM2Q15035 370 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 MST1LQ2TV78 715 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 C1orf140Q5VVS0 124 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 TTC33Q6PID6 262 aaPredicted RBP10.63□□□□□ -0.71
OPTN-212ENST00000487935 WDR88Q6ZMY6 472 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 TSEN54Q7Z6J9 526 aaKnown RBP10.63□□□□□ -0.71
OPTN-212ENST00000487935 NKAIN4Q8IVV8 208 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 C10orf53Q8N6V4 93 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 PIK3C3Q8NEB9 887 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 OR1K1Q8NGR3 316 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 STK35Q8TDR2 534 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 TMEM255BQ8WV15 326 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 SLC38A2Q96QD8 506 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 ZNF347Q96SE7 839 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 EPYCQ99645 322 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 PRSS27Q9BQR3 290 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 PIMREGQ9BSJ6 248 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 SHARPINQ9H0F6 387 aa10.63□□□□□ -0.71
OPTN-212ENST00000487935 TRAV36DV7A0A075B6V5 113 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 IGHV1-18A0A0C4DH31 117 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 OR6C65A6NJZ3 312 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 FKBP6O75344 327 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 PRSS23O95084 383 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 CRYAAP02489 173 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 GTF2E2P29084 291 aaKnown RBP10.62□□□□□ -0.71
OPTN-212ENST00000487935 RRM2P31350 389 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 MAGEA2P43356 314 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 RPS5P46782 204 aaKnown RBP10.62□□□□□ -0.71
OPTN-212ENST00000487935 SELENOPP49908 381 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 UBE2NP61088 152 aaKnown RBP10.62□□□□□ -0.71
OPTN-212ENST00000487935 SNRPD2P62316 118 aaKnown RBP10.62□□□□□ -0.71
OPTN-212ENST00000487935 GGTLC2Q14390 218 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 TBRG1Q3YBR2 411 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 NIPAL3Q6P499 406 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 C5orf46Q6UWT4 87 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 ZNF730Q6ZMV8 503 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 CREB3L2Q70SY1 520 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 PIWIL3Q7Z3Z3 882 aaKnown RBP10.62□□□□□ -0.71
OPTN-212ENST00000487935 TMEM239Q8WW34 195 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 KTI12Q96EK9 354 aaPredicted RBP10.62□□□□□ -0.71
OPTN-212ENST00000487935 SORCS2Q96PQ0 1159 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 TMEM43Q9BTV4 400 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 KATNB1Q9BVA0 655 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 CHID1Q9BWS9 393 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 YY1AP1Q9H869 796 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 NMNAT1Q9HAN9 279 aaPredicted RBP10.62□□□□□ -0.71
OPTN-212ENST00000487935 MAN2C1Q9NTJ4 1040 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 KCNS2Q9ULS6 477 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 RASD1Q9Y272 281 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 MED31Q9Y3C7 131 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 MXRA5Q9NR99 2828 aa10.62□□□□□ -0.71
OPTN-212ENST00000487935 ATRQ13535 2644 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms