RNA–Protein interactions for RNA: ENST00000487580.1

AC008040.1-201, humanhuman

TSL 3

Gene AC008040.1, Length 500 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008040.1-201ENST00000487580 TSG101Q99816 390 aa3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 KCTD14Q9BQ13 255 aaPredicted RBP3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 UTP23Q9BRU9 249 aaKnown RBP3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 BEX1Q9HBH7 125 aa3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 DEPPQ9NTK1 212 aa3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 IMP3Q9NV31 184 aaKnown RBP3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 RMND1Q9NWS8 449 aa3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 CLN6Q9NWW5 311 aa3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 USE1Q9NZ43 259 aa3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 B4GALT7Q9UBV7 327 aa3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 ICAM5Q9UMF0 924 aa3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 RAD50Q92878 1312 aa3.18□□□□□ -1.9
AC008040.1-201ENST00000487580 IGHV3-20A0A0C4DH32 117 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 GOLGA8IPA6NC78 632 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 GOLGA6L10A6NI86 522 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 C15orf61A6NNL5 157 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 LYRM9A8MSI8 78 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 C16orf97H3BN30 126 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 H3BN98 237 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 H3BNX3 289 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 SMLR1H3BR10 107 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 K7EQD1 137 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 MRPS12O15235 138 aaKnown RBP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 B4GALT5O43286 388 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 TRAPPC3O43617 180 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 CLDN11O75508 207 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 TRMUO75648 421 aaKnown RBP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 RBBP9O75884 186 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 OR5F1O95221 314 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 BRI3O95415 125 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 NTN1O95631 604 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 LSM8O95777 96 aaKnown RBP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 CLIC3O95833 236 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 SERPINA5P05154 406 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 TACSTD2P09758 323 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 H2AFZP0C0S5 128 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 SLC35E2BP0CK96 405 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 HTR1FP30939 366 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 DCTP40126 519 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 RFC3P40938 356 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 PTGDSP41222 190 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 RANBP1P43487 201 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 CSNK1A1P48729 337 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 FOXG1P55316 489 aaPredicted RBP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 TAS2R60P59551 318 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 SLC35B1P78383 322 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 PUDPQ08623 228 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 ILF3Q12906 894 aaKnown RBP eCLIP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 MED21Q13503 144 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 DPYSL3Q14195 570 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 PSMD5Q16401 504 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 C5orf64Q2M2E5 130 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 KIAA1644Q3SXP7 199 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 MS4A13Q5J8X5 152 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 WDR38Q5JTN6 314 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 ANKRD26P1Q6NSI1 321 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 APOBEC3HQ6NTF7 200 aaKnown RBP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 FAHD1Q6P587 224 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 RBMS3Q6XE24 437 aaKnown RBP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 C3P1Q6ZMU1 363 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 ABHD13Q7L211 337 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 GDPD3Q7L5L3 318 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 SSX7Q7RTT5 188 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 UNC93AQ86WB7 457 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 HOGA1Q86XE5 327 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 CCDC71Q8IV32 467 aaPredicted RBP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 ACOT4Q8N9L9 421 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 TMEM178AQ8NBL3 297 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 ZNRF1Q8ND25 227 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 ZNF740Q8NDX6 193 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 OR13A1Q8NGR1 328 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 OR2G2Q8NGZ5 317 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 ZNF502Q8TBZ5 544 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 RAB3CQ96E17 227 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 MOCOSQ96EN8 888 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 ZNF486Q96H40 463 aaPredicted RBP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 MS4A14Q96JA4 679 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 DNAJC1Q96KC8 554 aaKnown RBP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 C9orf85Q96MD7 179 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 SERPINB12Q96P63 405 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 IL17FQ96PD4 163 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 MS4A4EQ96PG1 132 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 TBX15Q96SF7 602 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 DCUN1D5Q9BTE7 237 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 NAA50Q9GZZ1 169 aaKnown RBP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 LIME1Q9H400 295 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 WDR54Q9H977 334 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 IL1RAPQ9NPH3 570 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 AGPAT4Q9NRZ5 378 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 ABCC13Q9NSE7 274 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 PAK1IP1Q9NWT1 392 aaPredicted RBP3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 B3GNT2Q9NY97 397 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 VAPAQ9P0L0 249 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 CSNK1G3Q9Y6M4 447 aa3.17□□□□□ -1.9
AC008040.1-201ENST00000487580 ZCCHC6Q5VYS8 1495 aaKnown RBP3.16□□□□□ -1.9
AC008040.1-201ENST00000487580 IGHV4-4A0A075B6R2 117 aa3.16□□□□□ -1.9
AC008040.1-201ENST00000487580 LOC100131303A0A0U1RQF7 123 aa3.16□□□□□ -1.9
AC008040.1-201ENST00000487580 TRABD2BA6NFA1 517 aa3.16□□□□□ -1.9
AC008040.1-201ENST00000487580 USP27XA6NNY8 438 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms