RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 SIGLEC11Q96RL6 698 aa10.04□□□□□ -0.8
ATPAF1-205ENST00000487193 BAG1Q99933 345 aaPredicted RBP10.04□□□□□ -0.8
ATPAF1-205ENST00000487193 BCL2L14Q9BZR8 327 aa10.04□□□□□ -0.8
ATPAF1-205ENST00000487193 MSL2Q9HCI7 577 aa10.04□□□□□ -0.8
ATPAF1-205ENST00000487193 MIOXQ9UGB7 285 aa10.04□□□□□ -0.8
ATPAF1-205ENST00000487193 FBXL3Q9UKT7 428 aa10.04□□□□□ -0.8
ATPAF1-205ENST00000487193 FAM159BA6NKW6 160 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 ZNF879B4DU55 563 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 CXCR1P25024 350 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 GTF2E2P29084 291 aaKnown RBP10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 CRHR1P34998 444 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 CCT3P49368 545 aaKnown RBP10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 GUCY2DQ02846 1103 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 CLCQ05315 142 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 C1DQ13901 141 aaKnown RBP10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 CHI3L2Q15782 390 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 RUNDC3AQ59EK9 446 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 COX20Q5RI15 118 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 MROH9Q5TGP6 573 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 SKA3Q8IX90 412 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 PAPD5Q8NDF8 572 aaKnown RBP10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 FAM71CQ8NEG0 241 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 OR4C13Q8NGP0 309 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 PYROXD1Q8WU10 500 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 SLC25A36Q96CQ1 311 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 OR2M2Q96R28 347 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 KCNA7Q96RP8 456 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 ZDHHC8Q9ULC8 765 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 TMCO1Q9UM00 188 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 SLC35A3Q9Y2D2 325 aa10.03□□□□□ -0.8
ATPAF1-205ENST00000487193 TCRBV9S1A1TA0A576 114 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 CLDN24A6NM45 220 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 RAD51CO43502 376 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 STX11O75558 287 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 OPN1SWP03999 348 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 MMP9P14780 707 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 FRKP42685 505 aaPredicted RBP10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 PITPNBP48739 271 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 MMP16P51512 607 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 COX10Q12887 443 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 IMPG1Q17R60 797 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 ZNF718Q3SXZ3 478 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 SPDYE7PQ495Y7 208 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 GPRIN3Q6ZVF9 776 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 LRRC8AQ8IWT6 810 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 OR8B3Q8NGG8 313 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 DPF1Q92782 380 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 CLPTM1LQ96KA5 538 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 WDFY2Q96P53 400 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 OR8B2Q96RD0 313 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 GPATCH2Q9NW75 528 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 NOP53Q9NZM5 478 aaKnown RBP10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 ZNRD1Q9P1U0 126 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 CLN8Q9UBY8 286 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 PPP1R3CQ9UQK1 317 aa10.02□□□□□ -0.81
ATPAF1-205ENST00000487193 C22orf46C9J442 243 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 TMEM178BH3BS89 294 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 ENSAO43768 121 aaKnown RBP10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 DUS4LO95620 317 aaKnown RBP10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 PF4P02776 101 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 IFNW1P05000 195 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 CD55P08174 381 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 ADH4P08319 380 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 KRT16P08779 473 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 CCDC159P0C7I6 412 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 PF4V1P10720 104 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 CCNOP22674 350 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 EPHA3P29320 983 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 RPS26P62854 115 aaKnown RBP10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 TBC1D28Q2M2D7 210 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 C3orf62Q6ZUJ4 267 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 CALHM3Q86XJ0 350 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 C20orf196Q8IYI0 205 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 TMEM123Q8N131 208 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 MIER2Q8N344 545 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 CNOT9Q92600 299 aaKnown RBP10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 MRRFQ96E11 262 aaKnown RBP10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 SAMD8Q96LT4 415 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 RCHY1Q96PM5 261 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 FOXB1Q99853 325 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 TMEM246Q9BRR3 403 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 REEP4Q9H6H4 257 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 CYSLTR2Q9NS75 346 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 SLC17A7Q9P2U7 560 aa10.01□□□□□ -0.81
ATPAF1-205ENST00000487193 E7ESA3 106 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 SUPT7LO94864 414 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 MFN2O95140 757 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 RBP1P09455 135 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 FBP1P09467 338 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 TNFRSF1AP19438 455 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 MAP2K6P52564 334 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 KCNJ10P78508 379 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 FAM153CQ494X1 144 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 METTL11BQ5VVY1 283 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 WDR25Q64LD2 544 aaPredicted RBP10□□□□□ -0.81
ATPAF1-205ENST00000487193 NLRC3Q7RTR2 1065 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 CCDC91Q7Z6B0 441 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 OR56A1Q8NGH5 318 aa10□□□□□ -0.81
ATPAF1-205ENST00000487193 CLHC1Q8NHS4 586 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms