RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 GZMMP51124 257 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 CRYBA2P53672 197 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 MELKQ14680 651 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 FAM166AQ6J272 317 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 SLC30A8Q8IWU4 369 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 PHC2Q8IXK0 858 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 FGFBP3Q8TAT2 258 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 TSPEARQ8WU66 669 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 TMEM54Q969K7 222 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 SOX7Q9BT81 388 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 TPK1Q9H3S4 243 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 NANSQ9NR45 359 aa21.18■□□□□ 0.98
LIME1-206ENST00000487026 LYNX1G3V0Z9 82 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 LYNX1P0DP58 116 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 ZNF35P13682 527 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 ZNF23P17027 643 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 VMACQ2NL98 169 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 NANOGP8Q6NSW7 305 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 SNX32Q86XE0 403 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 SKA3Q8IX90 412 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 ZNF540Q8NDQ6 660 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 OR6X1Q8NH79 312 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 NEU4Q8WWR8 484 aaPredicted RBP21.17■□□□□ 0.98
LIME1-206ENST00000487026 MRPL37Q9BZE1 423 aaKnown RBP21.17■□□□□ 0.98
LIME1-206ENST00000487026 NANOGQ9H9S0 305 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 GLTPQ9NZD2 209 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 FBXO9Q9UK97 447 aaPredicted RBP21.17■□□□□ 0.98
LIME1-206ENST00000487026 KCNS2Q9ULS6 477 aa21.17■□□□□ 0.98
LIME1-206ENST00000487026 PHF1O43189 567 aaPredicted RBP21.16■□□□□ 0.98
LIME1-206ENST00000487026 RAB36O95755 333 aa21.16■□□□□ 0.98
LIME1-206ENST00000487026 TGFAP01135 160 aa21.16■□□□□ 0.98
LIME1-206ENST00000487026 ERCC1P07992 297 aaPredicted RBP21.16■□□□□ 0.98
LIME1-206ENST00000487026 UMPSP11172 480 aa21.16■□□□□ 0.98
LIME1-206ENST00000487026 ZP4Q12836 540 aa21.16■□□□□ 0.98
LIME1-206ENST00000487026 SF3A3Q12874 501 aaKnown RBP eCLIP21.16■□□□□ 0.98
LIME1-206ENST00000487026 RAB39AQ14964 217 aa21.16■□□□□ 0.98
LIME1-206ENST00000487026 TRMT5Q32P41 509 aaKnown RBP21.16■□□□□ 0.98
LIME1-206ENST00000487026 RABL3Q5HYI8 236 aa21.16■□□□□ 0.98
LIME1-206ENST00000487026 LRFN4Q6PJG9 635 aa21.16■□□□□ 0.98
LIME1-206ENST00000487026 PRSS27Q9BQR3 290 aa21.16■□□□□ 0.98
LIME1-206ENST00000487026 REPIN1Q9BWE0 567 aaKnown RBP21.16■□□□□ 0.98
LIME1-206ENST00000487026 TMEM120AQ9BXJ8 343 aa21.16■□□□□ 0.98
LIME1-206ENST00000487026 VIPAS39Q9H9C1 493 aa21.16■□□□□ 0.98
LIME1-206ENST00000487026 LPAR3Q9UBY5 353 aa21.16■□□□□ 0.98
LIME1-206ENST00000487026 HIST1H2ABP04908 130 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 TNFRSF1BP20333 461 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 GIFP27352 417 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 FAM120AOSQ5T036 256 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 INTS11Q5TA45 600 aaKnown RBP21.15■□□□□ 0.98
LIME1-206ENST00000487026 METTL21CQ5VZV1 264 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 HIST3H2AQ7L7L0 130 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 LRP11Q86VZ4 500 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 TMEM158Q8WZ71 300 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 HIST1H2ACQ93077 130 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 MRPL24Q96A35 216 aaKnown RBP21.15■□□□□ 0.98
LIME1-206ENST00000487026 SYT3Q9BQG1 590 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 MEPEQ9NQ76 525 aaPredicted RBP21.15■□□□□ 0.98
LIME1-206ENST00000487026 ZNF229Q9UJW7 825 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 FZR1Q9UM11 496 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 SPEF1Q9Y4P9 236 aa21.15■□□□□ 0.98
LIME1-206ENST00000487026 BLOC1S5-TXNDC5H3BN57 136 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 UBL3O95164 117 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 TCN1P20061 433 aaPredicted RBP21.14■□□□□ 0.97
LIME1-206ENST00000487026 IL2RGP31785 369 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 CYLC2Q14093 348 aaPredicted RBP21.14■□□□□ 0.97
LIME1-206ENST00000487026 GKAP1Q5VSY0 366 aaPredicted RBP21.14■□□□□ 0.97
LIME1-206ENST00000487026 CCDC80Q76M96 950 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 PIWIL3Q7Z3Z3 882 aaKnown RBP21.14■□□□□ 0.97
LIME1-206ENST00000487026 ZNF786Q8N393 782 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 SLC22A24Q8N4F4 322 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 UBASH3BQ8TF42 649 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 ZNF566Q969W8 418 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 SLC25A44Q96H78 314 aaPredicted RBP21.14■□□□□ 0.97
LIME1-206ENST00000487026 MPP4Q96JB8 637 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 SH3GL3Q99963 347 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 SIKE1Q9BRV8 207 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 ZNF426Q9BUY5 554 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 PCDHAC1Q9H158 963 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 SH3GLB1Q9Y371 365 aa21.14■□□□□ 0.97
LIME1-206ENST00000487026 SHOX2O60902 331 aaPredicted RBP21.13■□□□□ 0.97
LIME1-206ENST00000487026 LILRA1O75019 489 aa21.13■□□□□ 0.97
LIME1-206ENST00000487026 ASAH2BP0C7U1 165 aa21.13■□□□□ 0.97
LIME1-206ENST00000487026 GLRXP35754 106 aa21.13■□□□□ 0.97
LIME1-206ENST00000487026 GALK2Q01415 458 aa21.13■□□□□ 0.97
LIME1-206ENST00000487026 CARM1Q86X55 608 aa21.13■□□□□ 0.97
LIME1-206ENST00000487026 ZNF584Q8IVC4 421 aa21.13■□□□□ 0.97
LIME1-206ENST00000487026 NKAIN4Q8IVV8 208 aa21.13■□□□□ 0.97
LIME1-206ENST00000487026 LRRC58Q96CX6 371 aa21.13■□□□□ 0.97
LIME1-206ENST00000487026 SLC19A3Q9BZV2 496 aa21.13■□□□□ 0.97
LIME1-206ENST00000487026 DENND2DQ9H6A0 471 aaPredicted RBP21.13■□□□□ 0.97
LIME1-206ENST00000487026 REV1Q9UBZ9 1251 aa21.13■□□□□ 0.97
LIME1-206ENST00000487026 DHHO43323 396 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 SYNGR3O43761 229 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 SASH3O75995 380 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 BCL10O95999 233 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 QDPRP09417 244 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 H2AFXP16104 143 aaPredicted RBP21.12■□□□□ 0.97
LIME1-206ENST00000487026 SRD5A1P18405 259 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 ALDH3B1P43353 468 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 SEC24CP53992 1094 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms