RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 NPTX1Q15818 432 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 TTC33Q6PID6 262 aaPredicted RBP14.79□□□□□ -0.04
SMC4-216ENST00000485645 SLC30A8Q8IWU4 369 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 GPR32P1Q8NGA4 272 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 MRPL24Q96A35 216 aaKnown RBP14.79□□□□□ -0.04
SMC4-216ENST00000485645 THOC1Q96FV9 657 aaKnown RBP14.79□□□□□ -0.04
SMC4-216ENST00000485645 MRPL37Q9BZE1 423 aaKnown RBP14.79□□□□□ -0.04
SMC4-216ENST00000485645 ZNF224Q9NZL3 707 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 SYNGR3O43761 229 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 EDF1O60869 148 aaKnown RBP14.78□□□□□ -0.04
SMC4-216ENST00000485645 CH25HO95992 272 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 IGFBP1P08833 259 aaPredicted RBP14.78□□□□□ -0.04
SMC4-216ENST00000485645 GLRXP35754 106 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 GALK2Q01415 458 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 ZP4Q12836 540 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 ZNF74Q16587 644 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 GKAP1Q5VSY0 366 aaPredicted RBP14.78□□□□□ -0.04
SMC4-216ENST00000485645 SLC35D2Q76EJ3 337 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 PIWIL3Q7Z3Z3 882 aaKnown RBP14.78□□□□□ -0.04
SMC4-216ENST00000485645 PATL1Q86TB9 770 aaKnown RBP14.78□□□□□ -0.04
SMC4-216ENST00000485645 RETREG3Q86VR2 466 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 OR6X1Q8NH79 312 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 VANGL1Q8TAA9 524 aaPredicted RBP14.78□□□□□ -0.04
SMC4-216ENST00000485645 SLC26A7Q8TE54 656 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 ADAMTS16Q8TE57 1224 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 TSPEARQ8WU66 669 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 SOX7Q9BT81 388 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 TPK1Q9H3S4 243 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 NANSQ9NR45 359 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 TAS2R5Q9NYW4 299 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 GLTPQ9NZD2 209 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 FBXL3Q9UKT7 428 aa14.78□□□□□ -0.04
SMC4-216ENST00000485645 TRAPPC13A5PLN9 417 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 M0R233 179 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 RNF13O43567 381 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 LILRA1O75019 489 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 ENTPD5O75356 428 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 THY1P04216 161 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 LSP1P33241 339 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 RPS23P62266 143 aaKnown RBP14.77□□□□□ -0.05
SMC4-216ENST00000485645 NFYCQ13952 458 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 MSMPQ1L6U9 139 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 HSP90B2PQ58FF3 399 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 WDR88Q6ZMY6 472 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 RBM45Q8IUH3 476 aaKnown RBP14.77□□□□□ -0.05
SMC4-216ENST00000485645 OR4D11Q8NGI4 311 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 HPS1Q92902 700 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 TMEM54Q969K7 222 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 ZNF566Q969W8 418 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 MPP4Q96JB8 637 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 MS4A5Q9H3V2 200 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 ZNF385DQ9H6B1 395 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 KAT8Q9H7Z6 458 aaKnown RBP14.77□□□□□ -0.05
SMC4-216ENST00000485645 MED4Q9NPJ6 270 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 REV1Q9UBZ9 1251 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 ZNF229Q9UJW7 825 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 SLC7A7Q9UM01 511 aa14.77□□□□□ -0.05
SMC4-216ENST00000485645 LYNX1G3V0Z9 82 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 KPNA4O00629 521 aaPredicted RBP14.76□□□□□ -0.05
SMC4-216ENST00000485645 LYPD3O95274 346 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 HIST1H2ABP04908 130 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 VIMP08670 466 aaKnown RBP14.76□□□□□ -0.05
SMC4-216ENST00000485645 LYNX1P0DP58 116 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 CD247P20963 164 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 APEX1P27695 318 aaKnown RBP14.76□□□□□ -0.05
SMC4-216ENST00000485645 RIN1Q13671 783 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 RAB39AQ14964 217 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 CR1LQ2VPA4 569 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 KRTAP24-1Q3LI83 254 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 INTS11Q5TA45 600 aaKnown RBP14.76□□□□□ -0.05
SMC4-216ENST00000485645 HIST3H2AQ7L7L0 130 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 SKA3Q8IX90 412 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 SLC22A24Q8N4F4 322 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 OR10A6Q8NH74 314 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 RASSF5Q8WWW0 418 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 HIST1H2ACQ93077 130 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 SLC25A44Q96H78 314 aaPredicted RBP14.76□□□□□ -0.05
SMC4-216ENST00000485645 SNX18Q96RF0 628 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 SYT3Q9BQG1 590 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 SIKE1Q9BRV8 207 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 SLC19A3Q9BZV2 496 aa14.76□□□□□ -0.05
SMC4-216ENST00000485645 ATP8B1O43520 1251 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 SERPINA5P05154 406 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 PATE4P0C8F1 98 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 OR8G3PP0DMU2 310 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 UMPSP11172 480 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 IL2RGP31785 369 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 PCGF2P35227 344 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 MELKQ14680 651 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 FXNQ16595 210 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 LRFN4Q6PJG9 635 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 UGT2A3Q6UWM9 527 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 LRRC17Q8N6Y2 441 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 LINC01356Q8N9X3 169 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 TAMM41Q96BW9 452 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 PCDHAC1Q9H158 963 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 NPHS2Q9NP85 383 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 SLC7A8Q9UHI5 535 aa14.75□□□□□ -0.05
SMC4-216ENST00000485645 DHHO43323 396 aa14.74□□□□□ -0.05
SMC4-216ENST00000485645 FARS2O95363 451 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms