RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ANGPT4Q9Y264 503 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 MT-ATP6P00846 226 aa16.53■□□□□ 0.24
COL27A1-205ENST00000485397 PCBP3P57721 371 aaKnown RBP16.53■□□□□ 0.24
COL27A1-205ENST00000485397 NPTX1Q15818 432 aa16.53■□□□□ 0.24
COL27A1-205ENST00000485397 FXNQ16595 210 aa16.53■□□□□ 0.24
COL27A1-205ENST00000485397 DUSP7Q16829 419 aa16.53■□□□□ 0.24
COL27A1-205ENST00000485397 SWT1Q5T5J6 900 aaKnown RBP16.53■□□□□ 0.24
COL27A1-205ENST00000485397 SNX32Q86XE0 403 aa16.53■□□□□ 0.24
COL27A1-205ENST00000485397 RFLNBQ8N5W9 214 aa16.53■□□□□ 0.24
COL27A1-205ENST00000485397 GPR32P1Q8NGA4 272 aa16.53■□□□□ 0.24
COL27A1-205ENST00000485397 OR6T1Q8NGN1 323 aa16.53■□□□□ 0.24
COL27A1-205ENST00000485397 TMEM54Q969K7 222 aa16.53■□□□□ 0.24
COL27A1-205ENST00000485397 MS4A5Q9H3V2 200 aa16.53■□□□□ 0.24
COL27A1-205ENST00000485397 EVA1AQ9H8M9 152 aa16.53■□□□□ 0.24
COL27A1-205ENST00000485397 CPSF4LA6NMK7 179 aaKnown RBP16.52■□□□□ 0.24
COL27A1-205ENST00000485397 M0QX08 132 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 HAX1O00165 279 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 UBL3O95164 117 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 OR6A2O95222 327 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 LYPD3O95274 346 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 CH25HO95992 272 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 THY1P04216 161 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 ATP4BP51164 291 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 GALK2Q01415 458 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 SELPLGQ14242 412 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 AGBL2Q5U5Z8 902 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 ZNF613Q6PF04 617 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 RINLQ6ZS11 566 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 SLC35D2Q76EJ3 337 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 RBM45Q8IUH3 476 aaKnown RBP16.52■□□□□ 0.24
COL27A1-205ENST00000485397 ZNF584Q8IVC4 421 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 OR4D11Q8NGI4 311 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 DENND2DQ9H6A0 471 aaPredicted RBP16.52■□□□□ 0.24
COL27A1-205ENST00000485397 NARFLQ9H6Q4 476 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 TAS2R5Q9NYW4 299 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 GLTPQ9NZD2 209 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 DUSP13Q9UII6 198 aa16.52■□□□□ 0.24
COL27A1-205ENST00000485397 TCF21O43680 179 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 CHP2O43745 196 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 FMO6PO60774 539 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 GPR6P46095 362 aaPredicted RBP16.51■□□□□ 0.23
COL27A1-205ENST00000485397 DVL1P1P54792 670 aaPredicted RBP16.51■□□□□ 0.23
COL27A1-205ENST00000485397 MELKQ14680 651 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 ZNF74Q16587 644 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 ENTPD8Q5MY95 495 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 LRFN4Q6PJG9 635 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 PIWIL3Q7Z3Z3 882 aaKnown RBP16.51■□□□□ 0.23
COL27A1-205ENST00000485397 LRRC17Q8N6Y2 441 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 C11orf65Q8NCR3 313 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 OR6X1Q8NH79 312 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 CLDND2Q8NHS1 167 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 RDH5Q92781 318 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 YIPF5Q969M3 257 aa16.51■□□□□ 0.23
COL27A1-205ENST00000485397 KPNA4O00629 521 aaPredicted RBP16.5■□□□□ 0.23
COL27A1-205ENST00000485397 WNT9BO14905 357 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 ERLIN1O75477 346 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 NCR1O76036 304 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 SERPINA5P05154 406 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 NAT2P11245 290 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 ITGA2P17301 1181 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 MTPNP58546 118 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 RPS23P62266 143 aaKnown RBP16.5■□□□□ 0.23
COL27A1-205ENST00000485397 ZP4Q12836 540 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 CYP51A1Q16850 503 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 ALKBH6Q3KRA9 238 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 UGT2A3Q6UWM9 527 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 DHDDSQ86SQ9 333 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 TSPYL5Q86VY4 417 aaPredicted RBP16.5■□□□□ 0.23
COL27A1-205ENST00000485397 SLC22A24Q8N4F4 322 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 VANGL1Q8TAA9 524 aaPredicted RBP16.5■□□□□ 0.23
COL27A1-205ENST00000485397 SH3GL3Q99963 347 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 LPAR2Q9HBW0 351 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 SLC7A8Q9UHI5 535 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 LEF1Q9UJU2 399 aaPredicted RBP16.5■□□□□ 0.23
COL27A1-205ENST00000485397 ANK2Q01484 3957 aa16.5■□□□□ 0.23
COL27A1-205ENST00000485397 A0A1W2PPW3 197 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 B4DSR2 109 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 FAM157AC9JC47 383 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 RNF13O43567 381 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 C8BP07358 591 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 FAM157BP0CG42 384 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 ACHEP22303 614 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 LSP1P33241 339 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 RBBP4Q09028 425 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 TTC33Q6PID6 262 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-205ENST00000485397 RETREG3Q86VR2 466 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 PAQR4Q8N4S7 273 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-205ENST00000485397 ADAMTS16Q8TE57 1224 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 ZNF566Q969W8 418 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 CGREF1Q99674 301 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 RACGAP1Q9H0H5 632 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 ZNF275Q9NSD4 429 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-205ENST00000485397 TMEM38BQ9NVV0 291 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 FBXL3Q9UKT7 428 aa16.49■□□□□ 0.23
COL27A1-205ENST00000485397 DHHO43323 396 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 CLPTM1O96005 669 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 OR8G3PP0DMU2 310 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 SAGP10523 405 aaPredicted RBP16.48■□□□□ 0.23
COL27A1-205ENST00000485397 CCL2P13500 99 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 CD247P20963 164 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms