RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 DNAJA3Q96EY1 480 aa5.3□□□□□ -1.56
CHD6-209ENST00000482596 CCDC140Q96MF4 163 aa5.3□□□□□ -1.56
CHD6-209ENST00000482596 FMO2Q99518 471 aa5.3□□□□□ -1.56
CHD6-209ENST00000482596 SH3GL1Q99961 368 aa5.3□□□□□ -1.56
CHD6-209ENST00000482596 SEMA6AQ9H2E6 1030 aa5.3□□□□□ -1.56
CHD6-209ENST00000482596 DPAGT1Q9H3H5 408 aa5.3□□□□□ -1.56
CHD6-209ENST00000482596 CNOT10Q9H9A5 744 aaKnown RBP5.3□□□□□ -1.56
CHD6-209ENST00000482596 ANKRA2Q9H9E1 313 aa5.3□□□□□ -1.56
CHD6-209ENST00000482596 PATZ1Q9HBE1 687 aaKnown RBP5.3□□□□□ -1.56
CHD6-209ENST00000482596 NOX3Q9HBY0 568 aa5.3□□□□□ -1.56
CHD6-209ENST00000482596 ACOXLQ9NUZ1 547 aa5.3□□□□□ -1.56
CHD6-209ENST00000482596 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.3□□□□□ -1.56
CHD6-209ENST00000482596 ZNF490Q9ULM2 529 aaPredicted RBP5.3□□□□□ -1.56
CHD6-209ENST00000482596 SLC22A14Q9Y267 594 aa5.3□□□□□ -1.56
CHD6-209ENST00000482596 KCNE2Q9Y6J6 123 aa5.3□□□□□ -1.56
CHD6-209ENST00000482596 V9GYY5 206 aaPredicted RBP5.3□□□□□ -1.56
CHD6-209ENST00000482596 IGLV3-32A0A0A0MS00 114 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 IGHV2-70DA0A0C4DH43 119 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 CENPVL1A0A0U1RR11 272 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 CENPVL3A0A0U1RRI6 287 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 RNF103-CHMP3A0A140T963 221 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 A0A1W2PR48 441 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 A0A1W2PRB8 838 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 NCF1BA6NI72 391 aaPredicted RBP5.29□□□□□ -1.56
CHD6-209ENST00000482596 NCF1CA8MVU1 366 aaPredicted RBP5.29□□□□□ -1.56
CHD6-209ENST00000482596 LTA4HP09960 611 aaKnown RBP5.29□□□□□ -1.56
CHD6-209ENST00000482596 C1GALT1C1LP0DN25 315 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 NCF1P14598 390 aaPredicted RBP5.29□□□□□ -1.56
CHD6-209ENST00000482596 ZNF14P17017 642 aaPredicted RBP5.29□□□□□ -1.56
CHD6-209ENST00000482596 MAKP20794 623 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 LSP1P33241 339 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 S100A5P33763 92 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 GDF5P43026 501 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 UAP1Q16222 522 aaPredicted RBP5.29□□□□□ -1.56
CHD6-209ENST00000482596 BAK1Q16611 211 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 AP5B1Q2VPB7 878 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 TRMT12Q53H54 448 aaKnown RBP5.29□□□□□ -1.56
CHD6-209ENST00000482596 SLC35F1Q5T1Q4 408 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 MROH9Q5TGP6 573 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 TSPO2Q5TGU0 170 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 SULT1C3Q6IMI6 304 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 TMEM154Q6P9G4 183 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 PXKQ7Z7A4 578 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 CMC1Q7Z7K0 106 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 ARMC8Q8IUR7 673 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 IFT20Q8IY31 132 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 ZNF101Q8IZC7 436 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 Q8N1X5 172 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 TTLQ8NG68 377 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 OR52R1Q8NGF1 315 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 OR2T6Q8NHC8 308 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 STAG3L4Q8TBR4 150 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 WIPF2Q8TF74 440 aaPredicted RBP5.29□□□□□ -1.56
CHD6-209ENST00000482596 CCL17Q92583 94 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 NEIL1Q96FI4 390 aaPredicted RBP5.29□□□□□ -1.56
CHD6-209ENST00000482596 TM2D3Q9BRN9 247 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 THUMPD3Q9BV44 507 aaKnown RBP5.29□□□□□ -1.56
CHD6-209ENST00000482596 CCDC106Q9BWC9 280 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 GPR61Q9BZJ8 451 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 ROGDIQ9GZN7 287 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 MMADHCQ9H3L0 296 aaPredicted RBP5.29□□□□□ -1.56
CHD6-209ENST00000482596 NMRAL1Q9HBL8 299 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 TNFRSF12AQ9NP84 129 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 SDHAF3Q9NRP4 125 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 MED17Q9NVC6 651 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 NINJ2Q9NZG7 142 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 MAT2BQ9NZL9 334 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 CD274Q9NZQ7 290 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 DNAJB9Q9UBS3 223 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 IL20RAQ9UHF4 553 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 GLS2Q9UI32 602 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 ZNF639Q9UID6 485 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 ACOT9Q9Y305 439 aa5.29□□□□□ -1.56
CHD6-209ENST00000482596 NUP214P35658 2090 aaPredicted RBP5.28□□□□□ -1.56
CHD6-209ENST00000482596 A0A087WUV0 522 aaPredicted RBP5.28□□□□□ -1.56
CHD6-209ENST00000482596 A0A096LPK6 155 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 C7orf72A4D263 438 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 AQP12BA6NM10 295 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 SYCE1LA8MT33 242 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 C17orf100A8MU93 164 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 H0YIV9 168 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 TAPBPO15533 448 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 PRAMEF4O60810 478 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 RAMP3O60896 148 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 STK16O75716 305 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 ANGPTL1O95841 491 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 IGHV2-70P01814 119 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 SCG5P05408 212 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 C2P06681 752 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 INHBAP08476 426 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 SBK2P0C263 348 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 FRMD6-AS1P0C7T7 363 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 UROSP10746 265 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 GSTM2P28161 218 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 TYK2P29597 1187 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 ECHS1P30084 290 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 GRK5P34947 590 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 ARL3P36405 182 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 SERPINB9P50453 376 aa5.28□□□□□ -1.56
CHD6-209ENST00000482596 GABPB1Q06547 395 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms