RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 RPL8P62917 257 aaKnown RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 IRX1P78414 480 aaPredicted RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 SLC7A9P82251 487 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ZNF85Q03923 595 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 SRSF9Q13242 221 aaKnown RBP eCLIP2.79□□□□□ -1.96
SMC6-208ENST00000481708 NFATC4Q14934 902 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ACTBL2Q562R1 376 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 OR5M10Q6IEU7 315 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ZNF627Q7L945 461 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ISCA2Q86U28 154 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 MMAAQ8IVH4 418 aaKnown RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 TPRX1Q8N7U7 411 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ING5Q8WYH8 240 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 RASL10AQ92737 203 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 SCRN2Q96FV2 425 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ZFYVE19Q96K21 471 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ATP5SQ99766 215 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ECSITQ9BQ95 431 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 UCK2Q9BZX2 261 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 NXF5Q9H1B4 397 aaKnown RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 TREX1Q9NSU2 369 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 RCOR3Q9P2K3 495 aaPredicted RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 MGAT4DA6NG13 374 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 OR5K4A6NMS3 321 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 PIRO00625 290 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ZNHIT1O43257 154 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 JCHAINP01591 159 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 KLK1P06870 262 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 GIMD1P0DJR0 217 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 HKR1P10072 659 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 MGMTP16455 207 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 HMGA1P17096 107 aaKnown RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 CCNOP22674 350 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 MATKP42679 507 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 UCNP55089 124 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 TRIP6Q15654 476 aaKnown RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 PRSS57Q6UWY2 283 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 BTNL3Q6UXE8 466 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 STAC2Q6ZMT1 411 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 BHLHA9Q7RTU4 235 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 ZNF444Q8N0Y2 327 aaPredicted RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 C2orf73Q8N5S3 287 aaPredicted RBP2.79□□□□□ -1.96
SMC6-208ENST00000481708 ZNF441Q8N8Z8 693 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 TMEM104Q8NE00 496 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 FBXL13Q8NEE6 735 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 OR52H1Q8NGJ2 320 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 TMEM255BQ8WV15 326 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 C8orf44Q96CB5 159 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 KLK15Q9H2R5 256 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 PPA2Q9H2U2 334 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 SLC12A6Q9UHW9 1150 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 PEX16Q9Y5Y5 336 aa2.79□□□□□ -1.96
SMC6-208ENST00000481708 SMCO2A6NFE2 343 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 TMCO5BA8MYB1 307 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 TOX3O15405 576 aaPredicted RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 RGS16O15492 202 aaPredicted RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 BCAR3O75815 825 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 HPP00738 406 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 IGLV3-27P01718 113 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 CISD3P0C7P0 127 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 TNNI1P19237 187 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 FUT6P51993 359 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 KPNA2P52292 529 aaKnown RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 GLYR1Q49A26 553 aaPredicted RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 UNC50Q53HI1 259 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 GPRC6AQ5T6X5 926 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 TIGD3Q6B0B8 471 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 SLC16A14Q7RTX9 510 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 C17orf64Q86WR6 236 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 GPALPP1Q8IXQ4 340 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 KIR3DL3Q8N743 410 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 OR4A4PQ8NGN8 299 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 FANK1Q8TC84 345 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 MAGEC3Q8TD91 643 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 GTF2H4Q92759 462 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 MYLPFQ96A32 169 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 OTULINQ96BN8 352 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 FAF2Q96CS3 445 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 C2orf48Q96LS8 159 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 TBX15Q96SF7 602 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 SH2D2AQ9NP31 389 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 PURGQ9UJV8 347 aaKnown RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 CDH10Q9Y6N8 788 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 LAMA1P25391 3075 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 FASNP49327 2511 aaKnown RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 SEMA3DO95025 777 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 ZBTB11O95625 1053 aaPredicted RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 COILP38432 576 aaPredicted RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 TMED10P49755 219 aaKnown RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 RGS1Q08116 209 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 SAPCD1Q5SSQ6 148 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 OR4N5Q8IXE1 308 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 ENTHD1Q8IYW4 607 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 SPATA3Q8NHX4 192 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 RDH11Q8TC12 318 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 PPP4R1Q8TF05 950 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 RNF138Q8WVD3 245 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 ACOT11Q8WXI4 607 aaPredicted RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 APH1AQ96BI3 265 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms