RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 C10orf53Q8N6V4 93 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 SLC30A7Q8NEW0 376 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 OR4M2Q8NGB6 313 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 SLC41A3Q96GZ6 507 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 PAIP1Q9H074 479 aaKnown RBP10.17□□□□□ -0.78
HDAC6-219ENST00000476625 C7orf69Q9H7B7 122 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 MOV10Q9HCE1 1003 aaKnown RBP10.17□□□□□ -0.78
HDAC6-219ENST00000476625 HINT3Q9NQE9 182 aaKnown RBP10.17□□□□□ -0.78
HDAC6-219ENST00000476625 MMP26Q9NRE1 261 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 CALML5Q9NZT1 146 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 ZNF69Q9UC07 566 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 HAO1Q9UJM8 370 aa10.17□□□□□ -0.78
HDAC6-219ENST00000476625 PLPP3O14495 311 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 TPD52L2O43399 206 aaKnown RBP10.16□□□□□ -0.78
HDAC6-219ENST00000476625 SPRY3O43610 288 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 AKAP8O43823 692 aaKnown RBP10.16□□□□□ -0.78
HDAC6-219ENST00000476625 BCL10O95999 233 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 OR8G3PP0DMU2 310 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 HOXB9P17482 250 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-219ENST00000476625 AQP1P29972 269 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 MPV17P39210 176 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 CSNK1A1P48729 337 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 RBBP4Q09028 425 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 RGNQ15493 299 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 MIDNQ504T8 468 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 KLF17Q5JT82 389 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-219ENST00000476625 C6orf10Q5SRN2 563 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 NXNQ6DKJ4 435 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 TREML4Q6UXN2 200 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 HOMEZQ8IX15 550 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 MSRB3Q8IXL7 192 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 SLC22A24Q8N4F4 322 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 LRRC17Q8N6Y2 441 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 EIF1ADQ8N9N8 165 aaKnown RBP10.16□□□□□ -0.78
HDAC6-219ENST00000476625 NANPQ8TBE9 248 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 SYNPRQ8TBG9 265 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 TMEM54Q969K7 222 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 LRRC58Q96CX6 371 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 ZBTB18Q99592 522 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 PAIP2Q9BPZ3 127 aaKnown RBP10.16□□□□□ -0.78
HDAC6-219ENST00000476625 ZNF385DQ9H6B1 395 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 ZNF696Q9H7X3 374 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 UNKLQ9H9P5 680 aaKnown RBP10.16□□□□□ -0.78
HDAC6-219ENST00000476625 UBAP1Q9NZ09 502 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 ZNF232Q9UNY5 417 aa10.16□□□□□ -0.78
HDAC6-219ENST00000476625 IGLV3-9A0A075B6K5 115 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 LOC102725191A0A1B0GVB3 256 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 MDFIC2A0A1B0GVS7 189 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 ISPDA4D126 451 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 ZSCAN5BA6NJL1 495 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 ZNF726A6NNF4 738 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 OR2T1O43869 369 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 SLC22A3O75751 556 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 UBL3O95164 117 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 IGHV1-46P01743 117 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 SERPINA5P05154 406 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 ZNF250P15622 560 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 OMGP23515 440 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 CRYBB2P43320 205 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 RAD52P43351 418 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 LIMS1P48059 325 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 CDH12P55289 794 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 KLF3P57682 345 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-219ENST00000476625 RPS23P62266 143 aaKnown RBP10.15□□□□□ -0.78
HDAC6-219ENST00000476625 MRPS11P82912 194 aaKnown RBP10.15□□□□□ -0.78
HDAC6-219ENST00000476625 TXNL4AP83876 142 aaKnown RBP10.15□□□□□ -0.78
HDAC6-219ENST00000476625 PUDPQ08623 228 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 OR1Q1Q15612 314 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 TMEM154Q6P9G4 183 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 LRFN4Q6PJG9 635 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 TSPYL5Q86VY4 417 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-219ENST00000476625 CCDC36Q8IYA8 594 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 ADPRHL1Q8NDY3 354 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 OR4K5Q8NGD3 323 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 GEMIN6Q8WXD5 167 aaKnown RBP10.15□□□□□ -0.78
HDAC6-219ENST00000476625 CCL17Q92583 94 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 OR52B2Q96RD2 323 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 JMJD8Q96S16 334 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 GAL3ST1Q99999 423 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 ASPNQ9BXN1 380 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 IKZF5Q9H5V7 419 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 A4GALTQ9NPC4 353 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 B3GAT2Q9NPZ5 323 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 SLC52A3Q9NQ40 469 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 DDX28Q9NUL7 540 aaKnown RBP10.15□□□□□ -0.78
HDAC6-219ENST00000476625 TMEM38BQ9NVV0 291 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 SLC25A37Q9NYZ2 338 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 SLAMF8Q9P0V8 285 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 LEF1Q9UJU2 399 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-219ENST00000476625 ZNF346Q9UL40 294 aaKnown RBP10.15□□□□□ -0.78
HDAC6-219ENST00000476625 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-219ENST00000476625 IFT52Q9Y366 437 aa10.15□□□□□ -0.78
HDAC6-219ENST00000476625 TGP01266 2768 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 MGAM2Q2M2H8 2515 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 A0A0B4J2E0 115 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 A0A1B0GX12 115 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 CLDN25C9JDP6 229 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 TRAPPC2LH3BP13 241 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 M0R3H8 397 aa10.14□□□□□ -0.79
HDAC6-219ENST00000476625 KPNA4O00629 521 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms