RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 J3KTA2 159 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 PDLIM1O00151 329 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 IFNA2P01563 188 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 MT-ND1P03886 318 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 CSF3P09919 207 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 PAX7P23759 505 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 APOBEC3AP31941 199 aaPredicted RBP13.21□□□□□ -0.29
VARS-223ENST00000474643 UGT2B15P54855 530 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 SH3BGRP55822 239 aaPredicted RBP13.21□□□□□ -0.29
VARS-223ENST00000474643 POU3F1Q03052 451 aaPredicted RBP13.21□□□□□ -0.29
VARS-223ENST00000474643 PUDPQ08623 228 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 TRAM2Q15035 370 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 CARTPTQ16568 116 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 ZNF74Q16587 644 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 B3GLCTQ6Y288 498 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 SLC46A3Q7Z3Q1 461 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 NANOGNBQ7Z5D8 188 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 DHFR2Q86XF0 187 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 AQP12AQ8IXF9 295 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 WDR31Q8NA23 367 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 ADPRHL1Q8NDY3 354 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 PFN4Q8NHR9 129 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 FAM168AQ92567 244 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 SGTBQ96EQ0 304 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 PRSS27Q9BQR3 290 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 MRPL39Q9NYK5 338 aaKnown RBP13.21□□□□□ -0.29
VARS-223ENST00000474643 SLC7A8Q9UHI5 535 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 A4GNTQ9UNA3 340 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 CADP27708 2225 aa13.21□□□□□ -0.29
VARS-223ENST00000474643 IGHV4-30-2A0A087WSY4 118 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 A0A096LPE4 126 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 A0A1W2PPZ6 126 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 hCG_2039718K7EN88 272 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 RNF13O43567 381 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 CD5LO43866 347 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 CRLF1O75462 422 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 SLC25A16P16260 332 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 ITGA2P17301 1181 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 ROR2Q01974 943 aaKnown RBP13.2□□□□□ -0.3
VARS-223ENST00000474643 TBRG1Q3YBR2 411 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 VHLLQ6RSH7 139 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 PRIMA1Q86XR5 153 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 EPHX4Q8IUS5 362 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 C10orf67Q8IYJ2 551 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 OFCC1Q8IZS5 231 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 ZNF525Q8N782 197 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 ZIC4Q8N9L1 334 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 OR1K1Q8NGR3 316 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 PYURFQ96I23 114 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 SLC38A2Q96QD8 506 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 VRK1Q99986 396 aaPredicted RBP13.2□□□□□ -0.3
VARS-223ENST00000474643 ZNF229Q9UJW7 825 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 POMPQ9Y244 141 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 NOX1Q9Y5S8 564 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 ENPP4Q9Y6X5 453 aa13.2□□□□□ -0.3
VARS-223ENST00000474643 ZNF726A6NNF4 738 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 KIAA1324LA8MWY0 1029 aaPredicted RBP13.19□□□□□ -0.3
VARS-223ENST00000474643 MS4A18H0YCH9 400 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 BLOC1S5-TXNDC5H3BN57 136 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 H7C417 338 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 PLPP3O14495 311 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 PDE5AO76074 875 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 OR7A10O76100 309 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
VARS-223ENST00000474643 IFI30P13284 250 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 FUT1P19526 365 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 EFNA4P52798 201 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 LGALS3BPQ08380 585 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 MS4A18Q3C1V0 323 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 FGD3Q5JSP0 725 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 CARD17Q5XLA6 110 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 C11orf71Q6IPW1 123 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 ANKRD16Q6P6B7 361 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 CYP2R1Q6VVX0 501 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 ZNF730Q6ZMV8 503 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 CDK20Q8IZL9 346 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 LRRC17Q8N6Y2 441 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 PIK3C3Q8NEB9 887 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 LRGUKQ96M69 825 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 ZNF426Q9BUY5 554 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 B3GAT2Q9NPZ5 323 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 MEPEQ9NQ76 525 aaPredicted RBP13.19□□□□□ -0.3
VARS-223ENST00000474643 B3GAT1Q9P2W7 334 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 RCE1Q9Y256 329 aa13.19□□□□□ -0.3
VARS-223ENST00000474643 ALPK2Q86TB3 2170 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 IGHV1-18A0A0C4DH31 117 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 A8MV72 311 aaPredicted RBP13.18□□□□□ -0.3
VARS-223ENST00000474643 PIP5K1CO60331 668 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 FZD7O75084 574 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 CIB2O75838 187 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 HPRP00739 348 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 H1F0P07305 194 aaKnown RBP13.18□□□□□ -0.3
VARS-223ENST00000474643 HLA-DOBP13765 273 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 TUBA1BP68363 451 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 TUBA4AP68366 448 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 MS4A2Q01362 244 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 FLOT2Q14254 428 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 CHRFAM7AQ494W8 412 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 TUBA1AQ71U36 451 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 PXKQ7Z7A4 578 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms