RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 WDR88Q6ZMY6 472 aa17.6■□□□□ 0.41
PDLIM4-206ENST00000474421 PIWIL3Q7Z3Z3 882 aaKnown RBP17.6■□□□□ 0.41
PDLIM4-206ENST00000474421 RBM45Q8IUH3 476 aaKnown RBP17.6■□□□□ 0.41
PDLIM4-206ENST00000474421 OR8J3Q8NGG0 315 aa17.6■□□□□ 0.41
PDLIM4-206ENST00000474421 ZNF566Q969W8 418 aa17.6■□□□□ 0.41
PDLIM4-206ENST00000474421 ECSITQ9BQ95 431 aa17.6■□□□□ 0.41
PDLIM4-206ENST00000474421 ZNF426Q9BUY5 554 aa17.6■□□□□ 0.41
PDLIM4-206ENST00000474421 NANOGQ9H9S0 305 aa17.6■□□□□ 0.41
PDLIM4-206ENST00000474421 GLTPQ9NZD2 209 aa17.6■□□□□ 0.41
PDLIM4-206ENST00000474421 BAG5Q9UL15 447 aa17.6■□□□□ 0.41
PDLIM4-206ENST00000474421 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.59■□□□□ 0.411e-5■■■■□ 21.5
PDLIM4-206ENST00000474421 LMX1BO60663 402 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 THY1P04216 161 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 TROVE2P10155 538 aaKnown RBP eCLIP17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 ZNF14P17017 642 aaPredicted RBP17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 LSP1P33241 339 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 PTDSS1P48651 473 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 GZMMP51124 257 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 RPS23P62266 143 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 RAB1AP62820 205 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 GALK2Q01415 458 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 MMEL1Q495T6 779 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 FAM166AQ6J272 317 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 OR4D11Q8NGI4 311 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 TMEM54Q969K7 222 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 SLC25A44Q96H78 314 aaPredicted RBP17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 TMEM120AQ9BXJ8 343 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 POLR2J2Q9GZM3 115 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 SHARPINQ9H0F6 387 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 POLR2J3Q9H1A7 115 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 TAS2R5Q9NYW4 299 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 KCNS2Q9ULS6 477 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 CUBNO60494 3623 aa17.59■□□□□ 0.41
PDLIM4-206ENST00000474421 TMEM129A0AVI4 362 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 BBIP1A8MTZ0 92 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 KPNA4O00629 521 aaPredicted RBP17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 FBP2O00757 339 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 IFNA14P01570 189 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 ASAH2BP0C7U1 165 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 UMPSP11172 480 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 ZNF35P13682 527 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 DAOP14920 347 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 ZNF23P17027 643 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 GIFP27352 417 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 GIPRP48546 466 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 MAPRE2Q15555 327 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 ERICH5Q6P6B1 374 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 NANOGNBQ7Z5D8 188 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 DPPA2Q7Z7J5 298 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 LRRC58Q96CX6 371 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 MS4A3Q96HJ5 214 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 ZNF75AQ96N20 296 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 BPESC1Q9GZL8 116 aa17.58■□□□□ 0.4
PDLIM4-206ENST00000474421 IGHV4-61A0A0C4DH41 118 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 LOC100289279A0A1B0GTE1 492 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 FARS2O95363 451 aaKnown RBP17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 STAMBPO95630 424 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 BCL10O95999 233 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 OR8G3PP0DMU2 310 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 GLRXP35754 106 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 RBM34P42696 430 aaKnown RBP17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 GKAP1Q5VSY0 366 aaPredicted RBP17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 HDDC2Q7Z4H3 204 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 CALHM3Q86XJ0 350 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 WDFY1Q8IWB7 410 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 CDK20Q8IZL9 346 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 SLC22A24Q8N4F4 322 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 MRPL24Q96A35 216 aaKnown RBP17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 ZNF224Q9NZL3 707 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 SH3GLB1Q9Y371 365 aa17.57■□□□□ 0.4
PDLIM4-206ENST00000474421 SH3PXD2BA1X283 911 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 RNF212BA8MTL3 300 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 SYNGR3O43761 229 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 IGF2P01344 180 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 IGHG1P01857 330 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 ADRA2AP08913 450 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 TAS2R41P59536 307 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 TSPYL5Q86VY4 417 aaPredicted RBP17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 CARM1Q86X55 608 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 ZNF786Q8N393 782 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 LRRC17Q8N6Y2 441 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 PCYOX1LQ8NBM8 494 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 UBASH3BQ8TF42 649 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 TMEM158Q8WZ71 300 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 MSI2Q96DH6 328 aaKnown RBP17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 MS4A5Q9H3V2 200 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 GID8Q9NWU2 228 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 SLC7A8Q9UHI5 535 aa17.56■□□□□ 0.4
PDLIM4-206ENST00000474421 A0A1W2PRG6 482 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 CENPBD1B2RD01 187 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 M0R233 179 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 FXYD1O00168 92 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 MRASO14807 208 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 DHHO43323 396 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 OR5F1O95221 314 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 MT-ND1P03886 318 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 SERPINA5P05154 406 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 PGA4P0DJD7 388 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 PGA3P0DJD8 388 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 HNF1AP20823 631 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms