RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 TRMT5Q32P41 509 aaKnown RBP19.46■□□□□ 0.71
C9orf3-213ENST00000471978 METTL21CQ5VZV1 264 aa19.46■□□□□ 0.71
C9orf3-213ENST00000471978 TSPYL5Q86VY4 417 aaPredicted RBP19.46■□□□□ 0.71
C9orf3-213ENST00000471978 OR6X1Q8NH79 312 aa19.46■□□□□ 0.71
C9orf3-213ENST00000471978 ZNF75AQ96N20 296 aa19.46■□□□□ 0.71
C9orf3-213ENST00000471978 CHODLQ9H9P2 273 aa19.46■□□□□ 0.71
C9orf3-213ENST00000471978 ZNF224Q9NZL3 707 aa19.46■□□□□ 0.71
C9orf3-213ENST00000471978 SPEF1Q9Y4P9 236 aa19.46■□□□□ 0.71
C9orf3-213ENST00000471978 MALRD1Q5VYJ5 2156 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 RNF13O43567 381 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 RAB36O95755 333 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 HIST1H2ABP04908 130 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 ADRA2AP08913 450 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 ZNF35P13682 527 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 ZNF23P17027 643 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 IGFBP5P24593 272 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 ZP4Q12836 540 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 VMACQ2NL98 169 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 HIST3H2AQ7L7L0 130 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 LRRC17Q8N6Y2 441 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 TMEM158Q8WZ71 300 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 HIST1H2ACQ93077 130 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 TMEM54Q969K7 222 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 MPP4Q96JB8 637 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 PCDHAC1Q9H158 963 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 DENND2DQ9H6A0 471 aaPredicted RBP19.45■□□□□ 0.7
C9orf3-213ENST00000471978 GLTPQ9NZD2 209 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 ZNF229Q9UJW7 825 aa19.45■□□□□ 0.7
C9orf3-213ENST00000471978 FBP2O00757 339 aa19.44■□□□□ 0.7
C9orf3-213ENST00000471978 UBL3O95164 117 aa19.44■□□□□ 0.7
C9orf3-213ENST00000471978 IGFBP1P08833 259 aaPredicted RBP19.44■□□□□ 0.7
C9orf3-213ENST00000471978 GIFP27352 417 aa19.44■□□□□ 0.7
C9orf3-213ENST00000471978 GZMMP51124 257 aa19.44■□□□□ 0.7
C9orf3-213ENST00000471978 CYLC2Q14093 348 aaPredicted RBP19.44■□□□□ 0.7
C9orf3-213ENST00000471978 NANOGP8Q6NSW7 305 aa19.44■□□□□ 0.7
C9orf3-213ENST00000471978 PIWIL3Q7Z3Z3 882 aaKnown RBP19.44■□□□□ 0.7
C9orf3-213ENST00000471978 RASSF5Q8WWW0 418 aa19.44■□□□□ 0.7
C9orf3-213ENST00000471978 ZNF566Q969W8 418 aa19.44■□□□□ 0.7
C9orf3-213ENST00000471978 MRPL24Q96A35 216 aaKnown RBP19.44■□□□□ 0.7
C9orf3-213ENST00000471978 ZNF426Q9BUY5 554 aa19.44■□□□□ 0.7
C9orf3-213ENST00000471978 SLC19A3Q9BZV2 496 aa19.44■□□□□ 0.7
C9orf3-213ENST00000471978 NANOGQ9H9S0 305 aa19.44■□□□□ 0.7
C9orf3-213ENST00000471978 ARGLU1Q9NWB6 273 aaPredicted RBP19.44■□□□□ 0.7
C9orf3-213ENST00000471978 PHF1O43189 567 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-213ENST00000471978 UMPSP11172 480 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 EVX1P49640 407 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 CRYBA2P53672 197 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 GALK2Q01415 458 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 MELKQ14680 651 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 MSMPQ1L6U9 139 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 GKAP1Q5VSY0 366 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-213ENST00000471978 CCDC80Q76M96 950 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 SKA3Q8IX90 412 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 PHC2Q8IXK0 858 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 ZNF786Q8N393 782 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 SLC25A44Q96H78 314 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-213ENST00000471978 REPIN1Q9BWE0 567 aaKnown RBP19.43■□□□□ 0.7
C9orf3-213ENST00000471978 MRPL37Q9BZE1 423 aaKnown RBP19.43■□□□□ 0.7
C9orf3-213ENST00000471978 TPK1Q9H3S4 243 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 FBXL3Q9UKT7 428 aa19.43■□□□□ 0.7
C9orf3-213ENST00000471978 LRP5LA4QPB2 252 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 TGFAP01135 160 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 VIMP08670 466 aaKnown RBP19.42■□□□□ 0.7
C9orf3-213ENST00000471978 ASAH2BP0C7U1 165 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 PATE4P0C8F1 98 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 GLRXP35754 106 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 RAB39AQ14964 217 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 RABL3Q5HYI8 236 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 FAM120AOSQ5T036 256 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 LRFN4Q6PJG9 635 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 IL17RELQ6ZVW7 336 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 SLC22A24Q8N4F4 322 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 UBASH3BQ8TF42 649 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 SH3GL1Q99961 368 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 PRSS27Q9BQR3 290 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 TMEM120AQ9BXJ8 343 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 SH3GLB1Q9Y371 365 aa19.42■□□□□ 0.7
C9orf3-213ENST00000471978 SYNGR3O43761 229 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 OR8G3PP0DMU2 310 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 SRD5A1P18405 259 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 CHN2P52757 468 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 NANOGNBQ7Z5D8 188 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 CARM1Q86X55 608 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 FGFBP3Q8TAT2 258 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 LRRC58Q96CX6 371 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 ECSITQ9BQ95 431 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 SYT3Q9BQG1 590 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 SOX7Q9BT81 388 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 MEPEQ9NQ76 525 aaPredicted RBP19.41■□□□□ 0.7
C9orf3-213ENST00000471978 REV1Q9UBZ9 1251 aa19.41■□□□□ 0.7
C9orf3-213ENST00000471978 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.41■□□□□ 0.71e-7■■□□□ 11.9
C9orf3-213ENST00000471978 BLOC1S5-TXNDC5H3BN57 136 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 M0R233 179 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 DHHO43323 396 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 ENTPD5O75356 428 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 BCL10O95999 233 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 SERPINA5P05154 406 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 TACSTD2P09758 323 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 PGA4P0DJD7 388 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 PGA3P0DJD8 388 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms