RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 RETREG3Q86VR2 466 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 C11orf65Q8NCR3 313 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 VANGL1Q8TAA9 524 aaPredicted RBP11.44□□□□□ -0.58
CPSF4-210ENST00000469897 FGFBP3Q8TAT2 258 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 MRPL24Q96A35 216 aaKnown RBP11.44□□□□□ -0.58
CPSF4-210ENST00000469897 SYT3Q9BQG1 590 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 RABEP2Q9H5N1 569 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 ZNF224Q9NZL3 707 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 DUSP13Q9UII6 198 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 FZR1Q9UM11 496 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 ABCA1O95477 2261 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 MXRA5Q9NR99 2828 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 KPNA4O00629 521 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-210ENST00000469897 RNF13O43567 381 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 CHP2O43745 196 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 SYNGR3O43761 229 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 FMO6PO60774 539 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 LYPD3O95274 346 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 RAB36O95755 333 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 GLRXP35754 106 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 ALDH3B1P43353 468 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 RBBP4Q09028 425 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 ZP4Q12836 540 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 RIN1Q13671 783 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 ZNF74Q16587 644 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 LRFN4Q6PJG9 635 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 PIWIL3Q7Z3Z3 882 aaKnown RBP11.43□□□□□ -0.58
CPSF4-210ENST00000469897 TSPYL5Q86VY4 417 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-210ENST00000469897 CARM1Q86X55 608 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 SNX32Q86XE0 403 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 LINC01356Q8N9X3 169 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 OR6X1Q8NH79 312 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 ADAMTS16Q8TE57 1224 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 HPS1Q92902 700 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 TMEM54Q969K7 222 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 CGREF1Q99674 301 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 SH3GL3Q99963 347 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 C19orf24Q9BVV8 132 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 MS4A5Q9H3V2 200 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 DENND2DQ9H6A0 471 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-210ENST00000469897 INTS9Q9NV88 658 aaKnown RBP11.43□□□□□ -0.58
CPSF4-210ENST00000469897 GLTPQ9NZD2 209 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 SLC7A7Q9UM01 511 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 SVEP1Q4LDE5 3571 aa11.43□□□□□ -0.58
CPSF4-210ENST00000469897 ANGPT2O15123 496 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 UBL3O95164 117 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 HPXP02790 462 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 HIST1H2ABP04908 130 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 SERPINA5P05154 406 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 GALK2Q01415 458 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 CCNIQ14094 377 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 MELKQ14680 651 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 MAD2L1BPQ15013 274 aaPredicted RBP11.42□□□□□ -0.58
CPSF4-210ENST00000469897 FXNQ16595 210 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 ELFN2Q5R3F8 820 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 HIST3H2AQ7L7L0 130 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 ZNF584Q8IVC4 421 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 SLC22A24Q8N4F4 322 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 DPP10Q8N608 796 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 OR10A6Q8NH74 314 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 HIST1H2ACQ93077 130 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 ZNF566Q969W8 418 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 KAT8Q9H7Z6 458 aaKnown RBP11.42□□□□□ -0.58
CPSF4-210ENST00000469897 NANSQ9NR45 359 aa11.42□□□□□ -0.58
CPSF4-210ENST00000469897 MYEF2Q9P2K5 600 aaKnown RBP11.42□□□□□ -0.58
CPSF4-210ENST00000469897 TMEFF2Q9UIK5 374 aaPredicted RBP11.42□□□□□ -0.58
CPSF4-210ENST00000469897 TRAPPC13A5PLN9 417 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 BLOC1S5-TXNDC5H3BN57 136 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 M0R233 179 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 DHHO43323 396 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 QDPRP09417 244 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 CCL2P13500 99 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 CD247P20963 164 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 NFYCQ13952 458 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 ALKBH6Q3KRA9 238 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 PATL1Q86TB9 770 aaKnown RBP11.41□□□□□ -0.58
CPSF4-210ENST00000469897 SLC26A7Q8TE54 656 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 SLC25A44Q96H78 314 aaPredicted RBP11.41□□□□□ -0.58
CPSF4-210ENST00000469897 ZNF385DQ9H6B1 395 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 RNF121Q9H920 327 aa11.41□□□□□ -0.58
CPSF4-210ENST00000469897 BCL10O95999 233 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 CLPTM1O96005 669 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 F13BP05160 661 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 FAM157BP0CG42 384 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 OR8G3PP0DMU2 310 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 UMPSP11172 480 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 NAT2P11245 290 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 LSP1P33241 339 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 SRP14P37108 136 aaKnown RBP11.4□□□□□ -0.58
CPSF4-210ENST00000469897 GZMMP51124 257 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 CDH15P55291 814 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 OR4K5Q8NGD3 323 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 RDH5Q92781 318 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 TAMM41Q96BW9 452 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 C1orf159Q96HA4 380 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 MPP4Q96JB8 637 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 MAGEB18Q96M61 343 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 PRSS27Q9BQR3 290 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 NARFLQ9H6Q4 476 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 NPHS2Q9NP85 383 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms